RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PCDHB11Q9Y5F2 797 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 FBP2O00757 339 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PSIP1O75475 530 aaKnown RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 TNNI3P19429 210 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 CD22P20273 847 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 CD247P20963 164 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 CXCR2P25025 360 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 MAD2L1Q13257 205 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 APOFQ13790 326 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 SIM2Q14190 667 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 ERV3-1Q14264 604 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 NR1D2Q14995 579 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 CCDC92Q53HC0 331 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PHF19Q5T6S3 580 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 COMMD6Q7Z4G1 85 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 TBC1D21Q8IYX1 336 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PGAM4Q8N0Y7 254 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 OR4A15Q8NGL6 344 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 EFCAB11Q9BUY7 163 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 TEX101Q9BY14 249 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 ANKRA2Q9H9E1 313 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PNPLA3Q9NST1 481 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 VPS4BO75351 444 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 OPN1SWP03999 348 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 IL3P08700 152 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 DDX5P17844 614 aaKnown RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 PRKCQQ04759 706 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 KCNAB1Q14722 419 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ZIK1Q3SY52 487 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 WDR45BQ5MNZ6 344 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TCEAL6Q6IPX3 200 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TRIM40Q6P9F5 258 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF765Q7L2R6 523 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SNX29P2Q8IUI4 249 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SPEM1Q8N4L4 309 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 RCBTB1Q8NDN9 531 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 CANT1Q8WVQ1 401 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TCEAL3Q969E4 200 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 FBXL20Q96IG2 436 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 COX4I2Q96KJ9 171 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 GPATCH1Q9BRR8 931 aaKnown RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 EFHD1Q9BUP0 239 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TM9SF3Q9HD45 589 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 MYLKQ15746 1914 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 LCMT2O60294 686 aaKnown RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 IGHV4-34P06331 123 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 LAMP1P11279 417 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 RELAQ04206 551 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TEAD4Q15561 434 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ADRM1Q16186 407 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 C1orf189Q5VU69 101 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SDR16C5Q8N3Y7 309 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 PJA1Q8NG27 643 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 XAGE5Q8WWM1 108 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 CIDECQ96AQ7 238 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 INPP5KQ9BT40 448 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 WNT16Q9UBV4 365 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TECTAO75443 2155 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SLC9B1P1A6NJY1 282 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SOCS2O14508 198 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 RSL1D1O76021 490 aaKnown RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF26P17031 533 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ILF2Q12905 390 aaKnown RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ELOCQ15369 112 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 TBCELQ5QJ74 424 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 C6orf183Q5T699 404 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 PRAMEF17Q5VTA0 474 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 DHFR2Q86XF0 187 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 HOMEZQ8IX15 550 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 HCAR2Q8TDS4 363 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 VOPP1Q96AW1 172 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 RMND5AQ9H871 391 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 SLC2A4RGQ9NR83 387 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 GPRC5BQ9NZH0 403 aa15.19■□□□□ 0.02
PDGFB-201ENST00000331163 ATXN7L1Q9ULK2 861 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-201ENST00000331163 PRRC2CQ9Y520 2896 aaKnown RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 ALPK2Q86TB3 2170 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 H3BNH8 94 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 SLC35G6P0C7Q6 338 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 LIPEQ05469 1076 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 NNATQ16517 81 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF551Q7Z340 670 aaPredicted RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 RETREG3Q86VR2 466 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 CENPSQ8N2Z9 138 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 PLEKHA8Q96JA3 519 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 OSBPL11Q9BXB4 747 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 NUSAP1Q9BXS6 441 aaKnown RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 OLAHQ9NV23 265 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF624Q9P2J8 865 aaPredicted RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 AGAP14A8MT82 685 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 C5orf58C9J3I9 102 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 TRIM38O00635 465 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 YY2O15391 372 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 BCAS2O75934 225 aaPredicted RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 MATN4O95460 622 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 OXTRP30559 389 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 TRIM23P36406 574 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms