RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 PLEKHA3Q9HB20 300 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 RUVBL1Q9Y265 456 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 A0A1W2PPL8 197 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ICMTO60725 284 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CAPN15O75808 1086 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MMP8P22894 467 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 RIPPLY1Q0D2K3 151 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PIM3Q86V86 326 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF808Q8N4W9 903 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SLC15A4Q8N697 577 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZFP41Q8N8Y5 198 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GLB1L3Q8NCI6 653 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ARPC5O15511 151 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HMGN1P05114 100 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GRPRP30550 384 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GPC2Q8N158 579 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NLGN2Q8NFZ4 835 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR14C36Q8NHC7 312 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SNAPC3Q92966 411 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CXorf49A8MYA2 514 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 RFPL3O75679 317 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ARL6IP5O75915 188 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR8U9P0C7N5 309 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SEC13P55735 322 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR4K3Q96R72 315 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SHOXO15266 292 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 RNASEH2AO75792 299 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MT-ND5P03915 603 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MVKQ03426 396 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HIST2H3PS2Q5TEC6 136 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PRAMEF13Q5VWM6 474 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZDHHC20Q5W0Z9 365 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR51G2Q8NGK0 314 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ABHD5Q8WTS1 349 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SIRPGQ9P1W8 387 aa12.35□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SNAPINO95295 136 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NTSR2O95665 410 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 AMY2BP19961 511 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CHATP28329 748 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NOXA1Q86UR1 476 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 DCUN1D3Q8IWE4 304 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR13C3Q8NGS6 347 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 FANK1Q8TC84 345 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZBTB26Q9HCK0 441 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MAGED1Q9Y5V3 778 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HTRA2O43464 458 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NDST3O95803 873 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 RELAQ04206 551 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TMEM41BQ5BJD5 291 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 C9orf57Q5W0N0 161 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HMGN2P46Q86SG4 172 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 HAS1Q92839 578 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SNX27Q96L92 541 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PLCXD1Q9NUJ7 323 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 COL20A1Q9P218 1284 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MEIS3P2A8K0S8 358 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 LILRB5O75023 590 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 IGFBP4P22692 258 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MAT2AP31153 395 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SKA3Q8IX90 412 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF527Q8NB42 609 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 MOB1AQ9H8S9 216 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 FKBPLQ9UIM3 349 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF175Q9Y473 711 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NOX1Q9Y5S8 564 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CDH10Q9Y6N8 788 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 AGTR1P30556 359 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PTH2RP49190 550 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ACTA2P62736 377 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ACTG2P63267 376 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ACTC1P68032 377 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ACTA1P68133 377 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NOMO2Q5JPE7 1267 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NOXRED1Q6NXP6 359 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GALNT13Q8IUC8 556 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 KCNA7Q96RP8 456 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 DPEP2Q9H4A9 486 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NLKQ9UBE8 527 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 LRCH4O75427 683 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ARAFP10398 606 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GSK3BP49841 420 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms