RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ACOT8O14734 319 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 APOA1P02647 267 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 MPC1LP0DKB6 136 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 AZGP1P25311 298 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 RPL4P36578 427 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 NR1D2Q14995 579 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 MMP21Q8N119 569 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 RBM18Q96H35 190 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 ZDHHC7Q9NXF8 308 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 TAS2R9Q9NYW1 312 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 CLEC4AQ9UMR7 237 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 PRAMEF33A0A0G2JMD5 474 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 OR6C74A6NCV1 312 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 LINC01565O15544 149 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 SRPRAP08240 638 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 LAMP2P13473 410 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 GSTM5P46439 218 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 RPS3AP61247 264 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 SP140Q13342 867 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 EIF4HQ15056 248 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 TMEM236Q5W0B7 351 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 ADGRG6Q86SQ4 1221 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 AQP11Q8NBQ7 271 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 TSTD1Q8NFU3 115 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 GATA6Q92908 595 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 ISG20Q96AZ6 181 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 MAELQ96JY0 434 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 POLR2J3Q9H1A7 115 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 TMED5Q9Y3A6 229 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 A0A096LPI6 279 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 AGXTP21549 392 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 AKT2P31751 481 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 MYBPC1Q00872 1141 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 HLA-DQA1Q5Y7H0 255 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 USP53Q70EK8 1073 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 UBE2J2Q8N2K1 259 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 ATP6V1C2Q8NEY4 427 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 OR5D16Q8NGK9 328 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 IKZF5Q9H5V7 419 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 MAPRE3Q9UPY8 281 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 MRPS7Q9Y2R9 242 aaKnown RBP15.37■□□□□ 0.05
SYNM-201ENST00000328642 PCDHGB3Q9Y5G1 929 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 WDR87Q6ZQQ6 2873 aa15.37■□□□□ 0.05
SYNM-201ENST00000328642 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 WASHC1A8K0Z3 465 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 ADAMDEC1O15204 470 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 PIM1P11309 404 aaPredicted RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 CSNK1DP48730 415 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 RPS21P63220 83 aaKnown RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 HOXC5Q00444 222 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 ZNF155Q12901 538 aaPredicted RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 TEAD4Q15561 434 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 LCN8Q6JVE9 175 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 WASH2PQ6VEQ5 465 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 PRSS16Q9NQE7 514 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 CCNB2O95067 398 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 C1orf105O95561 183 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 CSNK2A2P19784 350 aaPredicted RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 CDK3Q00526 305 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 WSCD2Q2TBF2 565 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 KHDRBS2Q5VWX1 349 aaKnown RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 ZC3H14Q6PJT7 736 aaKnown RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 RPLP0P6Q8NHW5 317 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 C1GALT1C1Q96EU7 318 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 LGR4Q9BXB1 951 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 TTTY10Q9BZA0 68 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 MED16Q9Y2X0 877 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 URADA6NGE7 173 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 DNAJA1P31689 397 aaKnown RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 B4GALNT1Q00973 533 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 TMEM107Q6UX40 140 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 RNF111Q6ZNA4 994 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 TMC8Q8IU68 726 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 OR51V1Q9H2C8 321 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 ANKRA2Q9H9E1 313 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 MBNL1Q9NR56 388 aaKnown RBP15.36■□□□□ 0.05
SYNM-201ENST00000328642 EHD3Q9NZN3 535 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 DNAJC27Q9NZQ0 273 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 ERGIC3Q9Y282 383 aa15.36■□□□□ 0.05
SYNM-201ENST00000328642 H3BSH0 61 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 H7C0S8 307 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 TFPTP0C1Z6 253 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 GGT1P19440 569 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 VSX2P58304 361 aaPredicted RBP15.35■□□□□ 0.05
SYNM-201ENST00000328642 DPPA4Q7L190 304 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 OR8J3Q8NGG0 315 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 C16orf78Q8WTQ4 265 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 NCSTNQ92542 709 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 C12orf43Q96C57 262 aaKnown RBP15.35■□□□□ 0.05
SYNM-201ENST00000328642 PHOX2BQ99453 314 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 FEVQ99581 238 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 NTMT1Q9BV86 223 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 SPATA7Q9P0W8 599 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 PIKFYVEQ9Y2I7 2098 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
SYNM-201ENST00000328642 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
SYNM-201ENST00000328642 UGT2B11O75310 529 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 ITGB7P26010 798 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 KRT20P35900 424 aa15.35■□□□□ 0.05
SYNM-201ENST00000328642 MMP12P39900 470 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms