RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 BEST3Q8N1M1 668 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 TMEM145Q8NBT3 493 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 FANK1Q8TC84 345 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 PHB2Q99623 299 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 TARBP1Q13395 1621 aaKnown RBP7.65□□□□□ -1.18
CIITA-201ENST00000324288 SLC38A8A6NNN8 435 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 SELPP16109 830 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 OGNP20774 298 aaKnown RBP7.65□□□□□ -1.18
CIITA-201ENST00000324288 RAB11BQ15907 218 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 PYURFQ96I23 114 aa7.65□□□□□ -1.18
CIITA-201ENST00000324288 K7EPK0 472 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 M0R129 80 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 POLR1CO15160 346 aaPredicted RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 OR2B3O76000 313 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 POP4O95707 220 aaKnown RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 HTR1AP08908 422 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 TAS2R39P59534 338 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 SSTP61278 116 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 FGL2Q14314 439 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 ANKRD54Q6NXT1 300 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 FAM71E2Q8N5Q1 922 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 ZNF709Q8N972 641 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 GATSQ8NAP1 163 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 OR7G2Q8NG99 324 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 CPT1CQ8TCG5 803 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 MKKSQ9NPJ1 570 aaPredicted RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 B3GALT1Q9Y5Z6 326 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 FANCMQ8IYD8 2048 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 KIAA0513O60268 411 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 WDPCPO95876 746 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 HLA-DQB2P05538 268 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 RHOQP17081 205 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 NAA10P41227 235 aaPredicted RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 GRIA1P42261 906 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 FBXO43Q4G163 708 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 ARSIQ5FYB1 569 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 ZFAND2BQ8WV99 257 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 RNF32Q9H0A6 362 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 PRMT8Q9NR22 394 aaPredicted RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 FAIMQ9NVQ4 179 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 EXTL2Q9UBQ6 330 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 AJAP1Q9UKB5 411 aaPredicted RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 PCDHB14Q9Y5E9 798 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 BORCS7-ASMTA0A0B4J1R7 106 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 MYBPHLA2RUH7 354 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 TYRP1P17643 537 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 NCS1P62166 190 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 GINS1Q14691 196 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 VARS2Q5ST30 1063 aaKnown RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 FUT10Q6P4F1 479 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 NLGN2Q8NFZ4 835 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 S100A16Q96FQ6 103 aaKnown RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 SSU72Q9NP77 194 aaKnown RBP7.65□□□□□ -1.19
CIITA-201ENST00000324288 CNTN6Q9UQ52 1028 aa7.65□□□□□ -1.19
CIITA-201ENST00000324288 MSCO60682 206 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ARHGAP12Q8IWW6 846 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PLEKHO2Q8TD55 490 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM68Q96MH6 324 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 C1orf21Q9H246 121 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RPS10P5Q9NQ39 176 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TRIM36Q9NQ86 728 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM98Q9Y2Y6 226 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 IFT52Q9Y366 437 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 DLX3O60479 287 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SLC16A8O95907 504 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ERVK-8P63133 956 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 OR52E4Q8NGH9 312 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ACOT12Q8WYK0 555 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 KIAA1210Q9ULL0 1709 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 MT-ND2P03891 347 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RAB4AP20338 218 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 DGKGP49619 791 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RGS6P49758 472 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZNF616Q08AN1 781 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CEACAM20Q6UY09 585 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PXYLP1Q8TE99 480 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SLC25A51Q9H1U9 297 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZNF282Q9UDV7 671 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 HSD17B2P37059 387 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RPS24P62847 133 aaKnown RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 OR51I1Q9H343 314 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM184CQ9NVA4 438 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGA6Q9Y5G7 932 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SCDO00767 359 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CILPO75339 1184 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 COL9A3Q14050 684 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 PTGR1Q14914 329 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ARHGAP40Q5TG30 622 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 NOXRED1Q6NXP6 359 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 FAM198BQ6UWH4 519 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 KLHL15Q96M94 604 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RAD9AQ99638 391 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 NDC1Q9BTX1 674 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 GPATCH2Q9NW75 528 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 UTS2RQ9UKP6 389 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 FRMPD1Q5SYB0 1578 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TTLL8A6PVC2 850 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms