RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 NXPE1Q8N323 547 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 OR2T35Q8NGX2 323 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TERB2Q8NHR7 220 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZBED6CLQ96FA7 236 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 EXTL2Q9UBQ6 330 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DNMT3LQ9UJW3 386 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CACNG2Q9Y698 323 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TEX13CA0A0J9YWL9 993 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 A0A1W2PPL8 197 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 GPR182O15218 404 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 INPPL1O15357 1258 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ATG13O75143 517 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 EPHX2P34913 555 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ADRA1BP35368 520 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NKX6-1P78426 367 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SPHARQ15513 63 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 FAM189A2Q15884 450 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 UBE2R2Q712K3 238 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PIGZQ86VD9 579 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 FBXO16Q8IX29 292 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SHKBP1Q8TBC3 707 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 KIAA1191Q96A73 305 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PELOQ9BRX2 385 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ULBP1Q9BZM6 244 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 IKZF4Q9H2S9 585 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 MED13Q9UHV7 2174 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 EIF1AYO14602 144 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 HK1P19367 917 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 EIF1AXP47813 144 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ALDH3B2P48448 385 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PITPNBP48739 271 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 MAXP61244 160 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 EMX1Q04741 257 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 EN1Q05925 392 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CD300LFQ8TDQ1 290 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TFAP2BQ92481 460 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SLC29A1Q99808 456 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 POPDC3Q9HBV1 291 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PRMT8Q9NR22 394 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LYARQ9NX58 379 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TVP23BQ9NYZ1 205 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ALPLP05186 524 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 MFSD10Q14728 455 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 Q3ZCU0 254 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NHSL2Q5HYW2 709 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 C10orf62Q5T681 223 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ARMC6Q6NXE6 501 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 GALNTL5Q7Z4T8 443 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TMPRSS11BQ86T26 416 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LDB1Q86U70 411 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 BEST3Q8N1M1 668 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PLD6Q8N2A8 252 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 C12orf45Q8N5I9 185 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 OR2M2Q96R28 347 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 B3GNT5Q9BYG0 378 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NIPAL2Q9H841 368 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NLKQ9UBE8 527 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 UBIAD1Q9Y5Z9 338 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 COL1A2P08123 1366 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 MAFO75444 373 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ARL6IP5O75915 188 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PIRTP0C851 137 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TRAPPC2P0DI81 140 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TRAPPC2BP0DI82 140 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 G6PDP11413 515 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 MMP12P39900 470 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 HSPA7P48741 367 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CCR4P51679 360 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NTRK2Q16620 822 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 RAB41Q5JT25 222 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 UBE2NLQ5JXB2 153 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CLEC12AQ5QGZ9 265 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ESRP1Q6NXG1 681 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC70Q7Z2Q7 622 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 OR4F6Q8NGB9 312 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 C1orf216Q8TAB5 229 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 BTN2A3PQ96KV6 586 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NARFLQ9H6Q4 476 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NEUROD4Q9HD90 331 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TAS2R8Q9NYW2 309 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NUFIP1Q9UHK0 495 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ASF1AQ9Y294 204 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CASTOR2A6NHX0 329 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SDHDO14521 159 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 THEGLP0DJG4 465 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 KCNC4Q03721 635 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 DUSP4Q13115 394 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SEC23BQ15437 767 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 HMGN3Q15651 99 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NCBP2-AS2Q69YL0 99 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PIM3Q86V86 326 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LYSMD2Q8IV50 215 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 BPIFA1Q9NP55 256 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 HEMK1Q9Y5R4 338 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 RAB19A4D1S5 217 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 RPIAP49247 311 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms