RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SQLEQ14534 574 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 MUM1Q2TAK8 710 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 HES3Q5TGS1 186 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 NUP210LQ5VU65 1888 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 MTDHQ86UE4 582 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 ZCCHC10Q8TBK6 192 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 MVB12AQ96EY5 273 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 C10orf90Q96M02 699 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 TEFMQ96QE5 360 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 CMKLR1Q99788 373 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 MYLK2Q9H1R3 596 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 COPS7BQ9H9Q2 264 aaPredicted RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 CLK4Q9HAZ1 481 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 TMEM45AQ9NWC5 275 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 IRAK4Q9NWZ3 460 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 OCIAD1Q9NX40 245 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 RARRES3Q9UL19 164 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 CLCA2Q9UQC9 943 aa12.92□□□□□ -0.34
PRPF18-201ENST00000320054 MRPS2Q9Y399 296 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 COPG1Q9Y678 874 aaKnown RBP12.92□□□□□ -0.34
PRPF18-201ENST00000320054 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ARHGAP10A1A4S6 786 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 EFCAB7A8K855 629 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 RTCAO00442 366 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 GALR3O60755 368 aaPredicted RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 KLHL18O94889 574 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 KLK1P06870 262 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 G6PDP11413 515 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ASMTP46597 345 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 STX1BP61266 288 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 BTN3A2P78410 334 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 FOXM1Q08050 763 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ZNF763Q0D2J5 394 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 RPS6KA2Q15349 733 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 CCNYL2Q5T2Q4 361 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 FAM91A1Q658Y4 838 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 MRM1Q6IN84 353 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 CYP20A1Q6UW02 462 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ZNF793Q6ZN11 406 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 IKBIPQ70UQ0 350 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 MIER2Q8N344 545 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 LIX1Q8N485 282 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ACOT4Q8N9L9 421 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 LRRC37BQ96QE4 947 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 NDC1Q9BTX1 674 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 SORBS1Q9BX66 1292 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 NMUR2Q9GZQ4 415 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 MYNNQ9NPC7 610 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 CUTCQ9NTM9 273 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 G3BP2Q9UN86 482 aaKnown RBP12.91□□□□□ -0.34
PRPF18-201ENST00000320054 SRPK3Q9UPE1 567 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 MAPRE3Q9UPY8 281 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
PRPF18-201ENST00000320054 CCDC187A0A096LP49 1063 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 A0A0G2JN53 185 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 GNG14A0A1W2PPG7 69 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 DSCR3O14972 297 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 ANKRD28O15084 1053 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 B3GALT2O43825 422 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 PRMT3O60678 531 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 GUCY1B2O75343 617 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 KCNK5O95279 499 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 MED26O95402 600 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 NSA2O95478 260 aaKnown RBP12.9□□□□□ -0.34
PRPF18-201ENST00000320054 GPX3P22352 226 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 TACR1P25103 407 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 MAPK12P53778 367 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 CLDN8P56748 225 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 C21orf58P58505 322 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 RAB15P59190 212 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
PRPF18-201ENST00000320054 SLC9A5Q14940 896 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 CLNKQ7Z7G1 428 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 TMPRSS12Q86WS5 348 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 PPP1R3BQ86XI6 285 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 PDSS2Q86YH6 399 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 AMER3Q8N944 861 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 C16orf78Q8WTQ4 265 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 MARK4Q96L34 752 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 LYARQ9NX58 379 aaKnown RBP12.9□□□□□ -0.34
PRPF18-201ENST00000320054 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 LOXL2Q9Y4K0 774 aa12.9□□□□□ -0.34
PRPF18-201ENST00000320054 H0YIG0 161 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms