RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 PPCDCQ96CD2 204 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 RHBGQ9H310 441 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 NTRK1P04629 796 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 TPP2P29144 1249 aaPredicted RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 AQP1P29972 269 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 TMED1Q13445 227 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 NFE2L1Q14494 772 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ELAVL3Q14576 367 aaKnown RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF630Q2M218 657 aaPredicted RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 PDZD3Q86UT5 571 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 DYNC2LI1Q8TCX1 351 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 OR8D1Q8WZ84 308 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 CCDC90BQ9GZT6 254 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 TAAR2Q9P1P5 351 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 OTOL1A6NHN0 477 aaPredicted RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 CLDN24A6NM45 220 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 PI15O43692 258 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 PFDN1O60925 122 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 GBAP04062 536 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 IDUAP35475 653 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 OPRL1P41146 370 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 CRATP43155 626 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 XCR1P46094 333 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 SLC6A11P48066 632 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 TAS2R50P59544 299 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 HTRA3P83110 453 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 RPA4Q13156 261 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 STARD3Q14849 445 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 HIST2H2ACQ16777 129 aaPredicted RBP13.19□□□□□ -0.3
ATG4C-201ENST00000317868 SLC5A12Q1EHB4 618 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 HIST2H2AA3Q6FI13 130 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF740Q8NDX6 193 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 UBE2E3Q969T4 207 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 FBXO8Q9NRD0 319 aa13.19□□□□□ -0.3
ATG4C-201ENST00000317868 ARRDC5A6NEK1 342 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 FAM20BO75063 409 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 TFPTP0C1Z6 253 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 RANBP1P43487 201 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 MEF2AQ02078 507 aaPredicted RBP13.18□□□□□ -0.3
ATG4C-201ENST00000317868 C2orf80Q0P641 193 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
ATG4C-201ENST00000317868 MICAQ29983 383 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PRAMEF13Q5VWM6 474 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 SLC9B2Q86UD5 537 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PPP1R16AQ96I34 528 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 FEVQ99581 238 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 ACSL6Q9UKU0 697 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 PLK4O00444 970 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 MMP20O60882 483 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 SEMA3DO95025 777 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 FGBP02675 491 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 NR4A1P22736 598 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 FRKP42685 505 aaPredicted RBP13.18□□□□□ -0.3
ATG4C-201ENST00000317868 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 TRIM40Q6P9F5 258 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 P2RY8Q86VZ1 359 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 NDNFQ8TB73 568 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF764Q96H86 408 aaPredicted RBP13.18□□□□□ -0.3
ATG4C-201ENST00000317868 WASH6PQ9NQA3 447 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 KCND3Q9UK17 655 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 POFUT2Q9Y2G5 429 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 DGKBQ9Y6T7 804 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
ATG4C-201ENST00000317868 CHD9Q3L8U1 2897 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 J3QRK9 145 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 SAP18O00422 153 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 CBFA2T3O75081 653 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 OPN1SWP03999 348 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 KLK1P06870 262 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 IL3P08700 152 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ANXA8P13928 327 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 PHEXP78562 749 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 CDK6Q00534 326 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 TBCEQ15813 527 aaPredicted RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 TRMT11Q7Z4G4 463 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 CCDC103Q8IW40 242 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 SLC5A8Q8N695 610 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 RHOXF1Q8NHV9 184 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms