RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ELMO1Q92556 727 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SNX18Q96RF0 628 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 C1GALT1Q9NS00 363 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SH3BP4Q9P0V3 963 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 LRFN2Q9ULH4 789 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 CLEC4EQ9ULY5 219 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 N6AMT1Q9Y5N5 214 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 NOX1Q9Y5S8 564 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 J3KTA2 159 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 UGT2B17O75795 530 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 CCNB2O95067 398 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 OLFM2O95897 454 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 PRKAR2AP13861 404 aaKnown RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 ENDOUP21128 410 aaKnown RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 E2F2Q14209 437 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 STARD3Q14849 445 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 BCL7AQ4VC05 210 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 THOC7Q6I9Y2 204 aaKnown RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 SLC44A2Q8IWA5 706 aaPredicted RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.31■□□□□ 0.523e-47■□□□□ 9.6
RTN4-201ENST00000317610 CEP19Q96LK0 163 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 OPALINQ96PE5 141 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 KCNS3Q9BQ31 491 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 FZD3Q9NPG1 666 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 C14orf119Q9NWQ9 140 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 CLN6Q9NWW5 311 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 ERVK13-1Q9NX77 482 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 PCDHGB2Q9Y5G2 931 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 IDH3BO43837 385 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 ZNF8P17098 575 aaPredicted RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 RHAGQ02094 409 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 DMC1Q14565 340 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 GPNMBQ14956 572 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 ATAD3CQ5T2N8 411 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 C6orf183Q5T699 404 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 RGMBQ6NW40 437 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 AGTRAPQ6RW13 159 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 RNF180Q86T96 592 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 OXR1Q8N573 874 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 OR7G3Q8NG95 312 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 HUS1BQ8NHY5 278 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 ASZ1Q8WWH4 475 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 SLC35A5Q9BS91 424 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 REEP4Q9H6H4 257 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 DYRK4Q9NR20 520 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
RTN4-201ENST00000317610 STOX2Q9P2F5 926 aaPredicted RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 LSM2Q9Y333 95 aaKnown RBP18.31■□□□□ 0.52
RTN4-201ENST00000317610 OBSL1O75147 1896 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 TBKBP1A7MCY6 615 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 SCG5P05408 212 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 SRCP12931 536 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 CD70P32970 193 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 PCBP3P57721 371 aaKnown RBP18.3■□□□□ 0.52
RTN4-201ENST00000317610 NAE1Q13564 534 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 KLHL17Q6TDP4 642 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 KRT73Q86Y46 540 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 WDR36Q8NI36 951 aaKnown RBP18.3■□□□□ 0.52
RTN4-201ENST00000317610 ROGDIQ9GZN7 287 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 SLC25A19Q9HC21 320 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 HHATLQ9HCP6 504 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 SNX8Q9Y5X2 465 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 ENPP4Q9Y6X5 453 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 DSPPQ9NZW4 1301 aa18.3■□□□□ 0.52
RTN4-201ENST00000317610 PRAMEF33A0A0G2JMD5 474 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 CXorf51AA0A1B0GTR3 108 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 HOXA2O43364 376 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 PRAMEF10O60809 474 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 AP2A2O94973 939 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 CRISP1P54107 249 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 PRKCZQ05513 592 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 VEPH1Q14D04 833 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 ZNF630Q2M218 657 aaPredicted RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 MPP7Q5T2T1 576 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 FRMPD2BQ6IN97 320 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 ZNF770Q6IQ21 691 aaPredicted RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 ANGPTL8Q6UXH0 198 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 GDPGP1Q6ZNW5 385 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 PTCHD4Q6ZW05 846 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 ARL14EPQ8N8R7 260 aaPredicted RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 OR4K1Q8NGD4 311 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 FIBINQ8TAL6 211 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 GTPBP3Q969Y2 492 aaKnown RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 SLC35F4A4IF30 521 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 MTX2O75431 263 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 GADD45GO95257 159 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 C6orf47O95873 294 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 IFNA14P01570 189 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 POU2F1P14859 743 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 CASP9P55211 416 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 CDK6Q00534 326 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 TP53BP2Q13625 1128 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 PDE7AQ13946 482 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 TPGS2Q68CL5 300 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 NRARPQ7Z6K4 114 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 DNAJB7Q7Z6W7 309 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms