RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 FKBP7Q9Y680 259 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 A0A1W2PPW3 197 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 EDN1P05305 212 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 ADRB2P07550 413 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 CSF2RAP15509 400 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 GGT1P19440 569 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 IL12BP29460 328 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 SLC25A11Q02978 314 aaKnown RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 CCINQ13939 588 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 PLGLAQ15195 96 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 PTPN20Q4JDL3 420 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 XKR4Q5GH76 650 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 CYP2R1Q6VVX0 501 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 GPRC5AQ8NFJ5 357 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 BMFQ96LC9 184 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 APBA2Q99767 749 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 OR10A4Q9H209 315 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 PLEKHA3Q9HB20 300 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 RBFOX1Q9NWB1 397 aaKnown RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 C17orf102A2RUQ5 167 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 SLC22A31A6NKX4 558 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF891A8MT65 544 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 FLRT2O43155 660 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 OR2B3O76000 313 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 FGF3P11487 239 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 KCNE1P15382 129 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 PPP2CAP67775 309 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 MFSD13AQ14CX5 517 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 PLEKHS1Q5SXH7 462 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 EFCAB12Q6NXP0 572 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 ZFAND4Q86XD8 727 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 TMEM190Q8WZ59 177 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 MAELQ96JY0 434 aaKnown RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 P2RX7Q99572 595 aaKnown RBP5.08□□□□□ -1.6
SCN1A-201ENST00000303395 HDHD5Q9BXW7 423 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 IRF2BPLQ9H1B7 796 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 TCF7L1Q9HCS4 588 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 RAB9BQ9NP90 201 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 AIG1Q9NVV5 245 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 POU2F3Q9UKI9 436 aa5.08□□□□□ -1.6
SCN1A-201ENST00000303395 DISC1C4P0D8 188 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 E5RJQ4 531 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 MPPED1O15442 326 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 LALBAP00709 142 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 RPL7P18124 248 aaKnown RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 PSMB4P28070 264 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 AIMP2Q13155 320 aaKnown RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 FAM46CQ5VWP2 391 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 DPY19L3Q6ZPD9 716 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF621Q6ZSS3 439 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TTLL10Q6ZVT0 673 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TMCO2Q7Z6W1 182 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 UMODL1-AS1Q8N2C9 162 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TRAPPC12Q8WVT3 735 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 EDEM1Q92611 657 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 ARL11Q969Q4 196 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 MUL1Q969V5 352 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 DHRS9Q9BPW9 319 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF700Q9H0M5 742 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 RHBGQ9H310 441 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 FZD8Q9H461 694 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 GBA2Q9HCG7 927 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 SPG21Q9NZD8 308 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 C14orf166Q9Y224 244 aaKnown RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CEPT1Q9Y6K0 416 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 EME2A4GXA9 379 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-201ENST00000303395 H0Y858 1186 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 K7EPI3 171 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CHEK1O14757 476 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 KIAA0355O15063 1070 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 NPC1O15118 1278 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 RFPL3O75679 317 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 UBXN7O94888 489 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 C22orf31O95567 290 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TRBC1P01850 177 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 EPORP19235 508 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF81P51508 661 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TAS2R50P59544 299 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 WDR45BQ5MNZ6 344 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CD276Q5ZPR3 534 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 DOK6Q6PKX4 331 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TRAPPC5Q8IUR0 188 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 OR6V1Q8N148 313 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 OR52K1Q8NGK4 314 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 SLC39A13Q96H72 371 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 OAZ3Q9UMX2 235 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 SCML1Q9UN30 329 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 ATG4BQ9Y4P1 393 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CSNK1G3Q9Y6M4 447 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 MOXD2PA6NHM9 499 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 H3BM21 787 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 CHRNB2P17787 502 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 TUBG1P23258 451 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 HNF1BP35680 557 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 GLRBP48167 497 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 STC1P52823 247 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 RHBDL3P58872 404 aa5.07□□□□□ -1.6
SCN1A-201ENST00000303395 EN1Q05925 392 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms