RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 H7C417 338 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TNFRSF10BO14763 440 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TLX2O43763 284 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 HCKP08631 526 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 IL1R2P27930 398 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC3A1Q07837 685 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM69Q5SWH9 247 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PDSS1Q5T2R2 415 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GDPGP1Q6ZNW5 385 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 LRRTM4Q86VH4 590 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC22A15Q8IZD6 547 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SUN3Q8TAQ9 357 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TSNAXQ99598 290 aaKnown RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 J3QRK9 145 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 AGRPO00253 132 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 NFE2L1Q14494 772 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PSRC1Q6PGN9 363 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CYP4V2Q6ZWL3 525 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 FBXL8Q96CD0 374 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TCEAL7Q9BRU2 100 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GXYLT2A0PJZ3 443 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 RHPN2P1A8MT19 583 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 J3QLW9 94 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LGR5O75473 907 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GABBR2O75899 941 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CXCL14O95715 111 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF19P17023 458 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PLA2G16P53816 162 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ARF3P61204 181 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ARF1P84077 181 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF267Q14586 743 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LINGO4Q6UY18 593 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 C3P1Q6ZMU1 363 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CYS1Q717R9 158 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZFAND4Q86XD8 727 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 RNF130Q86XS8 419 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TXNDC5Q8NBS9 432 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CNN2Q99439 309 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GPR88Q9GZN0 384 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SUV39H2Q9H5I1 410 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 B3GNT3Q9Y2A9 372 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LRP6O75581 1613 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 NAP1L6A6NFF2 107 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 YJEFN3A6XGL0 299 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 NIPSNAP2O75323 286 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GJB1P08034 283 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZBTB48P10074 688 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 G6PDP11413 515 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 FGF3P11487 239 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 HSD17B1P14061 328 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 S1PR1P21453 382 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SERINC3Q13530 473 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 HACD4Q5VWC8 232 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CIR1Q86X95 450 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 OR14C36Q8NHC7 312 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZCCHC10Q8TBK6 192 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CDKN2AIPNLQ96HQ2 116 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PIGVQ9NUD9 493 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PCDHGC4Q9Y5F7 938 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF638Q14966 1978 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 UNC119BA6NIH7 251 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PPM1BO75688 479 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 RBMXP38159 391 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF41P51814 821 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 DHCR24Q15392 516 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TREML2Q5T2D2 321 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LCN8Q6JVE9 175 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PLD6Q8N2A8 252 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SCGB1C1Q8TD33 95 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ALPPL2P10696 532 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 BMP2P12643 396 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CHMP24386 653 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LEPRP48357 1165 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ENTPD1P49961 510 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GHRHRQ02643 423 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 C6orf141Q5SZD1 244 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ARHGAP11AQ6P4F7 1023 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 FBXO22Q8NEZ5 403 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM203Q969S6 136 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 OR4K3Q96R72 315 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 IGFLR1Q9H665 355 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GPN2Q9H9Y4 310 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 MLLT3P42568 568 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 BRCC3P46736 316 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SNTA1Q13424 505 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 LSAMPQ13449 338 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CHRFAM7AQ494W8 412 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 STEAP4Q687X5 459 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SLC8B1Q6J4K2 584 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SNX29P2Q8IUI4 249 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 C1orf52Q8N6N3 182 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 NDRG1Q92597 394 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TSGA13Q96PP4 275 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SLC38A3Q99624 504 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms