RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 HOXC6P09630 235 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ALDH3B2P48448 385 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 BMXP51813 675 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ENPP2Q13822 863 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF584Q8IVC4 421 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 CLEC4CQ8WTT0 213 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ITPKCQ96DU7 683 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 NECAB3Q96P71 396 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 CCDC106Q9BWC9 280 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF696Q9H7X3 374 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 APOBEC3GQ9HC16 384 aaKnown RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 SPATA31A5Q5VU36 1347 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 SPATA31A7Q8IWB4 1347 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 HMX3A6NHT5 357 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 WNT10BO00744 389 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 SLC34A2O95436 690 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 FGL1Q08830 312 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 SPIN4Q56A73 249 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 FOLH1BQ9HBA9 442 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 FBRSL1Q9HCM7 1045 aaKnown RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 EVA1BQ9NVM1 165 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 EEF1E1-BLOC1S5C9J1V9 151 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 UNGP13051 313 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 PLEKHN1Q494U1 663 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 TMEM68Q96MH6 324 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ATG5Q9H1Y0 275 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 HSD3B7Q9H2F3 369 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 PPA2Q9H2U2 334 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ENY2Q9NPA8 101 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 ASF1BQ9NVP2 202 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 LAMP5Q9UJQ1 280 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 PPLO60437 1756 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 IDH3GP51553 393 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 GOLGA7Q7Z5G4 137 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 RDH12Q96NR8 316 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 TUBB1Q9H4B7 451 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 C19orf12Q9NSK7 152 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 AJAP1Q9UKB5 411 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-201ENST00000299333 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
SCN3B-201ENST00000299333 JCADQ9P266 1359 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 TEX13CA0A0J9YWL9 993 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CD8B2A6NJW9 211 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 BLOC1S5-TXNDC5H3BN57 136 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 LATS1O95835 1130 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CD8BP10966 210 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 DCKP27707 260 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GPR157Q5UAW9 335 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SFRP4Q6FHJ7 346 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLC39A4Q6P5W5 647 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CEACAM19Q7Z692 300 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 ARL14Q8N4G2 192 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 KCNN1Q92952 543 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SPOCK3Q9BQ16 436 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLC32A1Q9H598 525 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PTPRJQ12913 1337 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 KLRG2A4D1S0 409 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 DISP2A7MBM2 1401 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CDC7O00311 574 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 AHSGP02765 367 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 RAB5CP51148 216 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GAD2Q05329 585 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 FAXDC2Q96IV6 333 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GLIS2Q9BZE0 524 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SRMSQ9H3Y6 488 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 ZNF230Q9UIE0 474 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CDC14AQ9UNH5 594 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLC22A14Q9Y267 594 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 HYKKA2RU49 373 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 FAM189A1O60320 539 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 AGTR1P30556 359 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 RELAQ04206 551 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 GINS1Q14691 196 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PBDC1Q9BVG4 233 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 MFSD1Q9H3U5 465 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PCDHB3Q9Y5E6 796 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 LOC730098B7Z3J9 87 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 MANBAO00462 879 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 DNAJB5O75953 348 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 LYPLA2O95372 231 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 AHSA1O95433 338 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 IFNA5P01569 189 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 ADH1AP07327 375 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 CAMLGP49069 296 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 PPP5CP53041 499 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 NCS1P62166 190 aa14.36□□□□□ -0.11
SCN3B-201ENST00000299333 NFATC3Q12968 1075 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms