RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 AICDAQ9GZX7 198 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 LRIT2A6NDA9 550 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 CAPN5O15484 640 aaPredicted RBP14.83□□□□□ -0.04
LSM6-201ENST00000296581 TNFSF14O43557 240 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 HOXB3P14651 431 aaPredicted RBP14.83□□□□□ -0.04
LSM6-201ENST00000296581 UGT2B7P16662 529 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 HOXA6P31267 233 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 OR4D2P58180 307 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 C2orf80Q0P641 193 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 LRRC74AQ0VAA2 488 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 HYAL2Q12891 473 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 CCNYL2Q5T2Q4 361 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 NUDT13Q86X67 352 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 FAM46DQ8NEK8 389 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 TRPV3Q8NET8 790 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 ZDHHC1Q8WTX9 485 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 ECSITQ9BQ95 431 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 MIR1-1HGQ9H1L0 117 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 DUSP15Q9H1R2 295 aaPredicted RBP14.83□□□□□ -0.04
LSM6-201ENST00000296581 ACTR10Q9NZ32 417 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 PTTG2Q9NZH5 202 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 USP22Q9UPT9 525 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 PCDHGA2Q9Y5H1 932 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 ENTPD2Q9Y5L3 495 aa14.83□□□□□ -0.04
LSM6-201ENST00000296581 OR2A25A4D2G3 310 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 OR6C74A6NCV1 312 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 RTCAO00442 366 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 GSTM5P46439 218 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 ARFIP1P53367 373 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 NXPH1P58417 271 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 ZXDAP98168 799 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 DMWDQ09019 674 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 ELOCQ15369 112 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.82□□□□□ -0.04
LSM6-201ENST00000296581 ZNF385BQ569K4 471 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 IRAK1BP1Q5VVH5 260 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 VPS37AQ8NEZ2 397 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 NMD3Q96D46 503 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 PANX1Q96RD7 426 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 THUMPD3Q9BV44 507 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 KAT8Q9H7Z6 458 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 DDX31Q9H8H2 851 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 CD320Q9NPF0 282 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 C6orf203Q9P0P8 240 aaPredicted RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 ANKMY1Q9P2S6 941 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 ERVK-11Q9UQG0 969 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 KLHL20Q9Y2M5 609 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 KLK4Q9Y5K2 254 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 HTR3EA5X5Y0 456 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 BOLA2-SMG1P6H3BVE0 249 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 RNASET2O00584 256 aaKnown RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 MAGEB3O15480 346 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 FKBP9O95302 570 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 GSNP06396 782 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 IL3P08700 152 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 POLR2CP19387 275 aaPredicted RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 MC1RQ01726 317 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 AASDHQ4L235 1098 aaPredicted RBP14.82□□□□□ -0.04
LSM6-201ENST00000296581 TMEM26Q6ZUK4 368 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 PROSER1Q86XN7 944 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 TMEFF1Q8IYR6 380 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 CLECL1Q8IZS7 167 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 PQLC1Q8N2U9 271 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 SYNPO2LQ9H987 977 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 KNL1Q8NG31 2342 aa14.82□□□□□ -0.04
LSM6-201ENST00000296581 CCDC163A0A0D9SF12 145 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 C2orf74A8MZ97 194 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 CASQ2O14958 399 aaPredicted RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 TBX19O60806 448 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 SLC7A1P30825 629 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 GZMMP51124 257 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 MAPK12P53778 367 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 RPS15AP62244 130 aaKnown RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 SLC5A12Q1EHB4 618 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 CALHM3Q86XJ0 350 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 SPPL2CQ8IUH8 684 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 ZNF548Q8NEK5 533 aaPredicted RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 OR10A6Q8NH74 314 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 SLCO4A1Q96BD0 722 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 PPCDCQ96CD2 204 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 TM4SF18Q96CE8 201 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 AURKBQ96GD4 344 aaPredicted RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 SH3BP4Q9P0V3 963 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 MAGEL2Q9UJ55 1249 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 TP53BP1Q12888 1972 aaPredicted RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 SMIM31A0A1B0GVY4 71 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 ARHGAP10A1A4S6 786 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 VILLO15195 856 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 ZW10O43264 779 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 SERPIND1P05546 499 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 EMP3P54852 163 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 TRA2BP62995 288 aaKnown RBP14.81□□□□□ -0.04
LSM6-201ENST00000296581 HHEXQ03014 270 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 OR4C11Q6IEV9 310 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 GKN2Q86XP6 184 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 OR2T12Q8NG77 320 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 OR10G6Q8NH81 332 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms