RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PLD2O14939 933 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 OXTRP30559 389 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF630Q2M218 657 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-201ENST00000293441 C4orf46Q504U0 113 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 CYBRD1Q53TN4 286 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 FANK1Q8TC84 345 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 PSAT1Q9Y617 370 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 A0A1W2PP18 115 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 H6PDO95479 791 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 CYP17A1P05093 508 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 OR12D1P0DN82 309 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 BMPR1AP36894 532 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 OR1E2P47887 323 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 NNATQ16517 81 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 USP53Q70EK8 1073 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 IMP4Q96G21 291 aaKnown RBP16.67■□□□□ 0.26
SHANK1-201ENST00000293441 FCRL3Q96P31 734 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-201ENST00000293441 ZFR2Q9UPR6 939 aaKnown RBP16.67■□□□□ 0.26
SHANK1-201ENST00000293441 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 HCRTR2O43614 444 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 CLPXO76031 633 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 EPOP01588 193 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 CST6Q15828 149 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 LRIG1Q96JA1 1093 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 OR1A2Q9Y585 309 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 K7ERQ8 282 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 UQCRC2P22695 453 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 C1orf189Q5VU69 101 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 IL17FQ96PD4 163 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 POPDC3Q9HBV1 291 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 NLGN3Q9NZ94 848 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 DPPA5A6NC42 116 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 SDC3O75056 442 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 DNAJB1P25685 340 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 FCHO2Q0JRZ9 810 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 PRAMEF17Q5VTA0 474 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 PHTF2Q8N3S3 785 aa16.67■□□□□ 0.26
SHANK1-201ENST00000293441 SLC35F4A4IF30 521 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 FAM227AF5H4B4 570 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 C1GALT1C1LP0DN25 315 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 FECHP22830 423 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 SLC6A6P31641 620 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 PRKCDQ05655 676 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ELAVL3Q14576 367 aaKnown RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 TSTQ16762 297 aaKnown RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 SMURF1Q9HCE7 757 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 MS4A12Q9NXJ0 267 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 MEMO1Q9Y316 297 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 PIAS3Q9Y6X2 628 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 CD9P21926 228 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 FBXO46Q6PJ61 603 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 PRODH2Q9UF12 536 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 NPIPA2E9PIF3 369 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 NPIPA3F8WFD2 350 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 L7N2F9 121 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ORC5O43913 435 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 KCNC1P48547 511 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 VAMP2P63027 116 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 CARD17Q5XLA6 110 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ASB18Q6ZVZ8 466 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 MFSD2AQ8NA29 543 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ZSCAN4Q8NAM6 433 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 GNPDA2Q8TDQ7 276 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 C8orf33Q9H7E9 229 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 TRIM36Q9NQ86 728 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 SCGB1D2O95969 90 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 C6P13671 934 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 AP2S1P53680 142 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF234Q14588 700 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 LAPTM4AQ15012 233 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 RABL3Q5HYI8 236 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 BRF2Q9HAW0 419 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 ACOX3O15254 700 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 RAB36O95755 333 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 TIMP1P01033 207 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 FCER2P06734 321 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 FOSL2P15408 326 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 NTSR1P30989 418 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 TBPL1P62380 186 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 DOK4Q8TEW6 326 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 NPLQ9BXD5 320 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 OR51I1Q9H343 314 aa16.66■□□□□ 0.26
SHANK1-201ENST00000293441 METTL8Q9H825 291 aaKnown RBP16.66■□□□□ 0.26
SHANK1-201ENST00000293441 RLN2P04090 185 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 HTR1AP08908 422 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 PPP1R3AQ16821 1122 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF852Q6ZMS4 543 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 C9orf43Q8TAL5 461 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 CCDC115Q96NT0 180 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MCHR1Q99705 422 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 SLCO3A1Q9UIG8 710 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 FBXO9Q9UK97 447 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 CDH11P55287 796 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 PMS2P3Q13401 168 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 IRF5Q13568 498 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OCLNQ16625 522 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms