RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TUBB1Q9H4B7 451 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 SRRDQ9UH36 339 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PLAGL1Q9UM63 463 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 VIPP01282 170 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ANXA8P13928 327 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 STOMP27105 288 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ETV3P41162 512 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ABHD18Q0P651 414 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 AAK1Q2M2I8 961 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 IFI44LQ53G44 452 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 HSD17B12Q53GQ0 312 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 KIAA1161Q6NSJ0 714 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 GDPD4Q6W3E5 623 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RPTNQ6XPR3 784 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CHERPQ8IWX8 916 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 C1orf216Q8TAB5 229 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SNX33Q8WV41 574 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 QRFPRQ96P65 431 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 FERD3LQ96RJ6 166 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CENPBD1B2RD01 187 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SOX14O95416 240 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 MYF6P23409 242 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 UQCRC1P31930 480 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SGSHP51688 502 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RPS13P62277 151 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RCAN2Q14206 197 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 IER5LQ5T953 404 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SYNPOQ8N3V7 929 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 NETO1Q8TDF5 533 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC39A13Q96H72 371 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF641Q96N77 438 aaPredicted RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC35A5Q9BS91 424 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 IL17CQ9P0M4 197 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 INSL5Q9Y5Q6 135 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 DNMT3AQ9Y6K1 912 aaPredicted RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 A0A1B0GTL3 188 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 MATN4O95460 622 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PRH1P02810 166 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 MT-ND2P03891 347 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 DBIP07108 87 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RPS17P08708 135 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF24P17028 368 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PTNP21246 168 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 S100A2P29034 98 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 DNAJA1P31689 397 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ACSL1P33121 698 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PPP5CP53041 499 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CD47Q08722 323 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ATXN7L3Q14CW9 347 aaPredicted RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 LMNTD1Q8N9Z9 388 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 OR6C4Q8NGE1 309 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ISL2Q96A47 359 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CERS4Q9HA82 394 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 HCN3Q9P1Z3 774 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 H3BMQ9 156 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CD70P32970 193 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 DUOXA1Q1HG43 343 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SNAP47Q5SQN1 464 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RAB12Q6IQ22 244 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 CHST4Q8NCG5 386 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2T11Q8NH01 316 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PEX13Q92968 403 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 COG8Q96MW5 612 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 LHPPQ9H008 270 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 SYNDIG1Q9H7V2 258 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 TLR9Q9NR96 1032 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 GPRC5BQ9NZH0 403 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 RPL36Q9Y3U8 105 aaKnown RBP12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 PRSS21Q9Y6M0 314 aa12.1□□□□□ -0.47
SLC6A1-201ENST00000287766 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ATE1O95260 518 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 NPR2P20594 1047 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 PDHA2P29803 388 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF140P52738 457 aaPredicted RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM124AQ86V42 546 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 PHYKPLQ8IUZ5 450 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CADM2Q8N3J6 435 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 C9orf43Q8TAL5 461 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms