RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PCDHB7Q9Y5E2 793 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 KIF26AQ9ULI4 1882 aaPredicted RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 H0YIV9 168 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 CTDSP2O14595 271 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 SCAMP3O14828 347 aaKnown RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 SCAMP2O15127 329 aaKnown RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 TSPAN3O60637 253 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ANXA8P13928 327 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 CD72P21854 359 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 TNFSF8P32971 234 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 SLC19A1P41440 591 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 HTR2BP41595 481 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 OR3A3P47888 321 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ACLYP53396 1101 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ANXA8L1Q5VT79 327 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 TPGS2Q68CL5 300 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 MBOAT1Q6ZNC8 495 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ANKRD46Q86W74 232 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 SLC38A6Q8IZM9 456 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ADGRG2Q8IZP9 1017 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 CACTIN-AS1Q8N1I8 211 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 PAWRQ96IZ0 340 aaKnown RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 COPS8Q99627 209 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 MYOCQ99972 504 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 HMX1Q9NP08 348 aaPredicted RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 POFUT2Q9Y2G5 429 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 hCG_2039718K7EN88 272 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 KIAA0513O60268 411 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 PRAMEF4O60810 478 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ZNF821O75541 412 aaPredicted RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 IGSF6O95976 241 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ADORA3P0DMS8 318 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 PRKACBP22694 351 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 SLAMF1Q13291 335 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 C10orf62Q5T681 223 aaPredicted RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 PRAMEF9Q5VWM5 478 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 VTCN1Q7Z7D3 282 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 DEPDC4Q8N2C3 294 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 CPXM2Q8N436 756 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 GGHQ92820 318 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 SCRN2Q96FV2 425 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 TRNT1Q96Q11 434 aaKnown RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 TSEN34Q9BSV6 310 aaKnown RBP9.97□□□□□ -0.81
SKA1-201ENST00000285116 ASAH2Q9NR71 780 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 ENOPH1Q9UHY7 261 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
SKA1-201ENST00000285116 AP2A2O94973 939 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SRPRAP08240 638 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 UBL4AP11441 157 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 EN2P19622 333 aaPredicted RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 HIST1H2ADP20671 130 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SERPINA4P29622 427 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 PNLIPRP1P54315 467 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 RBBP4Q09028 425 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 PTCHD3Q3KNS1 767 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 CRTC1Q6UUV9 634 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 TSEN54Q7Z6J9 526 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 NPAS4Q8IUM7 802 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SYT12Q8IV01 421 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 APOLD1Q96LR9 279 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 KCNS3Q9BQ31 491 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 TPT1P8Q9HAU6 139 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 RANGRFQ9HD47 186 aaPredicted RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 CNOT2Q9NZN8 540 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 VPS29Q9UBQ0 182 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SH3D21A4FU49 640 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 RNASET2O00584 256 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 ADAM12O43184 909 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SUV39H1O43463 412 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 ERP29P30040 261 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 PFN3P60673 137 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SELENOWP63302 87 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 GRHL2Q6ISB3 625 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 LYPD8Q6UX82 237 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 TAS1R1Q7RTX1 841 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 LIX1LQ8IVB5 337 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 STX19Q8N4C7 294 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 ZFAND1Q8TCF1 268 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 MTFMTQ96DP5 389 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 CITED4Q96RK1 184 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 CDCA4Q9BXL8 241 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 CPEB1Q9BZB8 566 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 RACGAP1Q9H0H5 632 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 SMURF1Q9HCE7 757 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 NFKBIL1Q9UBC1 381 aaPredicted RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 KCNN3Q9UGI6 736 aa9.96□□□□□ -0.81
SKA1-201ENST00000285116 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.81
SKA1-201ENST00000285116 HELZP42694 1942 aaKnown RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 A0A0G2JMP0 313 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 NPIPB15A6NHN6 443 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms