RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KLHL18O94889 574 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 ZNF888P0CJ79 500 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 FOLR1P15328 257 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 NQO1P15559 274 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 JAK1P23458 1154 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 SSR2P43308 183 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 CLDN8P56748 225 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 RAB8AP61006 207 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 TRA2AQ13595 282 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 CCNYL2Q5T2Q4 361 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 ZNF793Q6ZN11 406 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 RCBTB1Q8NDN9 531 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 EGLN2Q96KS0 407 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 TMEM74Q96NL1 305 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 CADM1Q9BY67 442 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC52A3Q9NQ40 469 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 ENAMQ9NRM1 1142 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC22A7Q9Y694 548 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 ARHGAP10A1A4S6 786 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 HIST1H1TP22492 207 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ASMTP46597 345 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 E2F1Q01094 437 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ZFP36L1Q07352 338 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ZNF763Q0D2J5 394 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 GPR19Q15760 415 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 BLOC1S3Q6QNY0 202 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ARHGEF39Q8N4T4 335 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 CLHC1Q8NHS4 586 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ZCCHC10Q8TBK6 192 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 RCN3Q96D15 328 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC25A23Q9BV35 468 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 DPY30Q9C005 99 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ROGDIQ9GZN7 287 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 EP300Q09472 2414 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 A0A0A6YYD5 115 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 TMEM150CB9EJG8 249 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 FBP2O00757 339 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 GSC2O15499 205 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 RFPL3O75679 317 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 SCELO95171 688 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 KRT16P08779 473 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ALOX12P18054 663 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ATP5A1P25705 553 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 IL12AP29459 219 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 LIMK1P53667 647 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 SNRPNP63162 240 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 BTN3A2P78410 334 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC25A3Q00325 362 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 NHLH1Q02575 133 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 RCAN2Q14206 197 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 PHF19Q5T6S3 580 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ZCCHC7Q8N3Z6 543 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 AMER3Q8N944 861 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 ACOT4Q8N9L9 421 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 OR8K5Q8NH50 307 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 C16orf78Q8WTQ4 265 aa17.96■□□□□ 0.47
PDLIM3-202ENST00000284770 FITM1A5D6W6 292 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 C9JVG2 144 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 H3BMH7 237 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 AIM2O14862 343 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 ITGAXP20702 1163 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 CAPN3P20807 821 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 PRPS1L1P21108 318 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 MAPK12P53778 367 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 MXRA7P84157 204 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 STX5Q13190 355 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 TRIP6Q15654 476 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 RIPOR1Q6ZS17 1223 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 GLRX5Q86SX6 157 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 KRTCAP2Q8N6L1 136 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 GLB1L3Q8NCI6 653 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 TSPEARQ8WU66 669 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 ZNF501Q96CX3 271 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 SPRTNQ9H040 489 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 COPS7BQ9H9Q2 264 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 FGF21Q9NSA1 209 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 IRAK4Q9NWZ3 460 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 WBP11Q9Y2W2 641 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 MRPS2Q9Y399 296 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 PCDHGA1Q9Y5H4 931 aa17.95■□□□□ 0.46
PDLIM3-202ENST00000284770 A0A088AWK7 358 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 NR5A2O00482 541 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TMPRSS11DO60235 418 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 PRMT3O60678 531 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 OR2B3O76000 313 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 B3GALT4O96024 378 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 ZNF10P21506 573 aaPredicted RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 GSTM5P46439 218 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 NUDT2P50583 147 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 PDX1P52945 283 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 EMP3P54852 163 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 MTTPP55157 894 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 C21orf58P58505 322 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TAS2R50P59544 299 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TRA2BP62995 288 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 ACY1Q03154 408 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 GRM7Q14831 915 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 SLC9A5Q14940 896 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms