RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 GCDHQ92947 438 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 RRNAD1Q96FB5 475 aaKnown RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 G6PC3Q9BUM1 346 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 MEPEQ9NQ76 525 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ABRACLQ9P1F3 81 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 LOC100130705A0A1B0GUX0 176 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 LRP8Q14114 963 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 KHDC1Q4VXA5 237 aaKnown RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ACTR3BQ9P1U1 418 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SHROOM3Q8TF72 1996 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31A1Q5TZJ5 1347 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 TLX2O43763 284 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 TNFSF9P41273 254 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SERINC3Q13530 473 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 PLGLAQ15195 96 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 RSU1Q15404 277 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 NLGN2Q8NFZ4 835 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 OR5T1Q8NG75 326 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CDCA5Q96FF9 252 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ACSS2Q9NR19 701 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 DNAJC27Q9NZQ0 273 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31C2B4DYI2 1134 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 K7EPI3 171 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 BCHEP06276 602 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 NMBRP28336 390 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ERVK-16P61578 105 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 LRRC32Q14392 662 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 QPCTQ16769 361 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ITPRIPL2Q3MIP1 535 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SLC36A3Q495N2 470 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 BCL2L15Q5TBC7 163 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 FOXR2Q6PJQ5 311 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 S100A7AQ86SG5 101 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 XYLT1Q86Y38 959 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 NFKBIDQ8NI38 313 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CCDC106Q9BWC9 280 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SLC28A3Q9HAS3 691 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ACP6Q9NPH0 428 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 FAM120CQ9NX05 1096 aaKnown RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 GFOD1Q9NXC2 390 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 MS4A12Q9NXJ0 267 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 NAALAD2Q9Y3Q0 740 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 TMEM14AQ9Y6G1 99 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 RNF215Q9Y6U7 377 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 LRRC10BA6NIK2 292 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 PIP5K1CO60331 668 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ABCB7O75027 752 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 MAOAP21397 527 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 PPP5CP53041 499 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 INHBEP58166 350 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CAPSQ13938 189 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CYBRD1Q53TN4 286 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 HS3ST5Q8IZT8 346 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 BANPQ8N9N5 519 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 BBS1Q8NFJ9 593 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SLC35F5Q8WV83 523 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ALPK1Q96QP1 1244 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 FNIP2Q9P278 1114 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 PLATP00750 562 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 LPLP06858 475 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31D3P0C874 917 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 THBS2P35442 1172 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 KCNC1P48547 511 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 RABL3Q5HYI8 236 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31D4Q6ZUB0 917 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CCDC71LQ8N9Z2 235 aa8.45□□□□□ -1.06
NIPBL-201ENST00000282516 CADM1Q9BY67 442 aaKnown RBP8.45□□□□□ -1.06
NIPBL-201ENST00000282516 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PPIGQ13427 754 aaKnown RBP eCLIP8.44□□□□□ -1.064e-6■■□□□ 12.9
NIPBL-201ENST00000282516 SLC22A10Q63ZE4 541 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 MARVELD2Q8N4S9 558 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 YIPF4Q9BSR8 244 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 POLDIP3Q9BY77 421 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF442Q9H7R0 627 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 IGSF9Q9P2J2 1179 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SVILO95425 2214 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FRG2Q64ET8 278 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FRG2BQ96QU4 278 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 HBEGFQ99075 208 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 BEX2Q9BXY8 128 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TPT1P8Q9HAU6 139 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 BEX1Q9HBH7 125 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PAK1IP1Q9NWT1 392 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 IRF6O14896 467 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms