RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MMP11P24347 488 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 PIK3CBP42338 1070 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 CASP2P42575 452 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 KRT6CP48668 564 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 PGDP52209 483 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 NAGLUP54802 743 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ACTN3Q08043 901 aaPredicted RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 ASPHQ12797 758 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 HYAL2Q12891 473 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LCP2Q13094 533 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TRAF3Q13114 568 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 SLC13A2Q13183 592 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 RCN2Q14257 317 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ABRAXAS2Q15018 415 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 NSDHLQ15738 373 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LINC00303Q3SY05 128 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 TMEM35AQ53FP2 167 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 UNC50Q53HI1 259 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LIPMQ5VYY2 423 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 FAM219BQ5XKK7 198 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 FRG2Q64ET8 278 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LETMD1Q6P1Q0 360 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ABHD17CQ6PCB6 329 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 CYP20A1Q6UW02 462 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LRIG3Q6UXM1 1119 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LANCL3Q6ZV70 420 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 MED25Q71SY5 747 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 CLNKQ7Z7G1 428 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 NUDT13Q86X67 352 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 C10orf107Q8IVU9 208 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 PARP9Q8IXQ6 854 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 LAS2Q8IYD9 372 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 SHISA5Q8N114 240 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 CA13Q8N1Q1 262 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TMEM151AQ8N4L1 468 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 GOLGA6L1Q8N7Z2 621 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ANKRD42Q8N9B4 389 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TMEM102Q8N9M5 508 aaPredicted RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 BANPQ8N9N5 519 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 L3MBTL4Q8NA19 623 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 METTL6Q8TCB7 284 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 AGR3Q8TD06 166 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TCP10LQ8TDR4 215 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ADAMTS17Q8TE56 1095 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TTC9Q92623 222 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 RGMAQ96B86 450 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TBC1D20Q96BZ9 403 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 L3HYPDHQ96EM0 354 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 OR1F2PQ96R84 312 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 PAIP2Q9BPZ3 127 aaKnown RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 SLC25A23Q9BV35 468 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 MECRQ9BV79 373 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TRIM55Q9BYV6 548 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ROGDIQ9GZN7 287 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 VN1R1Q9GZP7 353 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ZBTB26Q9HCK0 441 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ENAMQ9NRM1 1142 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 SLC17A7Q9P2U7 560 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 COPG2Q9UBF2 871 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 TRPS1Q9UHF7 1281 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 FBXW2Q9UKT8 454 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 SNX6Q9UNH7 406 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 SLC12A4Q9UP95 1085 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 MRPS33Q9Y291 106 aaKnown RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 HS3ST3B1Q9Y662 390 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 IGF2RP11717 2491 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 IGLV3-12A0A075B6K2 115 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 A0A1B0GTL3 188 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 WDR91A4D1P6 747 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 A8MUA0 341 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 CLDN4O14493 209 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 SOCS6O14544 535 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 CTIFO43310 598 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 PRMT3O60678 531 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 DNAJB6O75190 326 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ONECUT2O95948 504 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 RECKO95980 971 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PDYNP01213 254 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 GBAP04062 536 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PRB1P04280 392 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 IFNA16P05015 189 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ALPPP05187 535 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 SFTPCP11686 197 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 CREB1P16220 341 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 NR1D1P20393 614 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MAOAP21397 527 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 IL10P22301 178 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 CPN2P22792 545 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ATP5A1P25705 553 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 PTX3P26022 381 aaPredicted RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 ALDH3A1P30838 453 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PKNOX1P55347 436 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 RAB38P57729 211 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 OR4D2P58180 307 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 SLC18A2Q05940 514 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 NFATC3Q12968 1075 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms