RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZNF3P17036 446 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CEBPBP17676 345 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 UQCRC2P22695 453 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 HOXC12P31275 282 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CDH15P55291 814 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 GFOD2Q3B7J2 385 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PUS10Q3MIT2 529 aaKnown RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 RBM48Q5RL73 367 aaKnown RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PIANPQ8IYJ0 282 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CLIP4Q8N3C7 705 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CPXM2Q8N436 756 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 OR5M3Q8NGP4 307 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 HUS1BQ8NHY5 278 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 HCAR2Q8TDS4 363 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KLHL6Q8WZ60 621 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TCEAL4Q96EI5 215 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 MCHR1Q99705 422 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TSSK6Q9BXA6 273 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TXLNGYQ9BZA5 131 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TCF7L1Q9HCS4 588 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TM9SF3Q9HD45 589 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SNTG1Q9NSN8 517 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 C19orf25Q9UFG5 118 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KLHL18O94889 574 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SOX14O95416 240 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 OR1E2P47887 323 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 GALK1P51570 392 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CD47Q08722 323 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PUM1Q14671 1186 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 VMACQ2NL98 169 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KIAA0319Q5VV43 1072 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF676Q8N7Q3 588 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KLHDC9Q8NEP7 349 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PHOSPHO2Q8TCD6 241 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TRMT2BQ96GJ1 504 aaKnown RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 RPF2Q9H7B2 306 aaKnown RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CENPMQ9NSP4 180 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SPATA6Q9NWH7 488 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PGAP2Q9UHJ9 254 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 BTAF1O14981 1849 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SAGE2PA6NJ88 616 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ANXA2P2A6NMY6 339 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TOR1BO14657 336 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TLX2O43763 284 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ANXA2P07355 339 aaKnown RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ARSAP15289 507 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 VLDLRP98155 873 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 NIPAL1Q6NVV3 410 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 UTS2BQ765I0 119 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 NANOGNBQ7Z5D8 188 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 C12orf40Q86WS4 652 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SLC15A3Q8IY34 581 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 HHIPL1Q96JK4 782 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SLC12A9Q9BXP2 914 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 FBRSQ9HAH7 460 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 RHCGQ9UBD6 479 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 PCTPQ9UKL6 214 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 EFCAB9A8MZ26 197 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 LATO43561 262 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 S100GP29377 79 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KDELR2P33947 212 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 GBX2P52951 348 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 DSC1Q08554 894 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 FADDQ13158 208 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF234Q14588 700 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 ADNP2Q6IQ32 1131 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 USP53Q70EK8 1073 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 KCNS3Q9BQ31 491 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TAS2R7Q9NYW3 318 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TNFRSF10DQ9UBN6 386 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 TIAM2Q8IVF5 1701 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 MYH14Q7Z406 1995 aaKnown RBP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 AHSA1O95433 338 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 ATF6P18850 670 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 MAGEA6P43360 314 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 HTR6P50406 440 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 SCN1BQ07699 218 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 RBBP4Q09028 425 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 TRNP1Q6NT89 227 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 BLOC1S3Q6QNY0 202 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 HSDL2Q6YN16 418 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 KLHL36Q8N4N3 616 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 PROKR2Q8NFJ6 384 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 SUN3Q8TAQ9 357 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 SH3YL1Q96HL8 342 aaPredicted RBP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 TGM7Q96PF1 710 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 TAF4O00268 1085 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 IFI30P13284 250 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 TGFBR2P37173 567 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 ARSFP54793 590 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 CLDN8P56748 225 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 SLC7A9P82251 487 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 UNC5DQ6UXZ4 953 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms