RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 E2F2Q14209 437 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SMN1Q16637 294 aaKnown RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 HKDC1Q2TB90 917 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 GGTA1PQ4G0N0 100 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FBXL22Q6P050 247 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SUSD1Q6UWL2 747 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 GDPGP1Q6ZNW5 385 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 GLT6D1Q7Z4J2 308 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 HORMAD1Q86X24 394 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 RNF130Q86XS8 419 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 P3H2Q8IVL5 708 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ZZZ3Q8IYH5 903 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FAM181AQ8N9Y4 354 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 HJURPQ8NCD3 748 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ERLEC1Q96DZ1 483 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 MED30Q96HR3 178 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 CDK15Q96Q40 435 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PSKH2Q96QS6 385 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 C6orf62Q9GZU0 229 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 MAGEH1Q9H213 219 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 REEP1Q9H902 201 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 MARCH7Q9H992 704 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ZDHHC4Q9NPG8 344 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PNMA8BQ9ULN7 279 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PCDHGB3Q9Y5G1 929 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 TAPBPO15533 448 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ATG13O75143 517 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GUCY1B2O75343 617 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SLITRK5O94991 958 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 DBTP11182 482 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ALOX12P18054 663 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GPX2P18283 190 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GABRB1P18505 474 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GTF2E2P29084 291 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SLC15A1P46059 708 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SEPHS1P49903 392 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 DMWDQ09019 674 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 BOP1Q14137 746 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 VMACQ2NL98 169 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF528Q3MIS6 628 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GTDC1Q4AE62 458 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 FBXO48Q5FWF7 155 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 MPP7Q5T2T1 576 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CERS6Q6ZMG9 384 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 PHACTR4Q8IZ21 702 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SLC22A15Q8IZD6 547 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CFAP52Q8N1V2 620 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 C1orf52Q8N6N3 182 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 Q8N9G6 341 aaPredicted RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 IL17RCQ8NAC3 791 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 MDGA1Q8NFP4 955 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 WFDC5Q8TCV5 224 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF675Q8TD23 568 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 GGHQ92820 318 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ATOH1Q92858 354 aaPredicted RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 IGSF8Q969P0 613 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CD244Q9BZW8 370 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 AASDHPPTQ9NRN7 309 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CNOT2Q9NZN8 540 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 KIF17Q9P2E2 1029 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SAMHD1Q9Y3Z3 626 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 U3KQV3 271 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CENPXA8MT69 81 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ULK1O75385 1050 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 KLF8O95600 359 aaPredicted RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ENDOUP21128 410 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 KDELR2P33947 212 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 TGFBR1P36897 503 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 RGS6P49758 472 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 MRPS21P82921 87 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF33BQ06732 778 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 PPP1R8Q12972 351 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ELOAQ14241 798 aaKnown RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 DUSP7Q16829 419 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 ZFP69Q49AA0 526 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CCNJQ5T5M9 372 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SYT13Q7L8C5 426 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 PIANPQ8IYJ0 282 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SYTL1Q8IYJ3 562 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 RGL4Q8IZJ4 473 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 CELF2-AS1Q8N7Q2 184 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 NELL1Q92832 810 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 RNF170Q96K19 258 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 OR2A14Q96R47 310 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SLC30A2Q9BRI3 323 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 RHNO1Q9BSD3 238 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 FAM126AQ9BYI3 521 aaPredicted RBP9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SLC6A13Q9NSD5 602 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 QPCTLQ9NXS2 382 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 TBC1D24Q9ULP9 559 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 PADI2Q9Y2J8 665 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 MAU2Q9Y6X3 613 aa9.92□□□□□ -0.82
UPF3B-201ENST00000276201 SH3D21A4FU49 640 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 F5H5T6 163 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms