RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DUS1LQ6P1R4 473 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 IQCHQ86VS3 1027 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 CCDC116Q8IYX3 515 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 CHFRQ96EP1 664 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 MAELQ96JY0 434 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF597Q96LX8 424 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 URADA6NGE7 173 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 F11P03951 625 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 SLC35G6P0C7Q6 338 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 CPN2P22792 545 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 CCR2P41597 374 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 RPS6KA3P51812 740 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 RPP38P78345 283 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 SP140Q13342 867 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 LSAMPQ13449 338 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 AMZ1Q400G9 498 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 VRK3Q8IV63 474 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 GHDCQ8N2G8 530 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 OXR1Q8N573 874 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 TMEM102Q8N9M5 508 aaPredicted RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 NEIL2Q969S2 332 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 RGMAQ96B86 450 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 AHCYL2Q96HN2 611 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 HERC2P3Q9BVR0 1158 aa13.79□□□□□ -0.2
TMEM47-201ENST00000275954 POLR2J2Q9GZM3 115 aaKnown RBP13.79□□□□□ -0.2
TMEM47-201ENST00000275954 TARM1B6A8C7 271 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 OR7A17O14581 309 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 HOXB6P17509 224 aaKnown RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CD247P20963 164 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 DCTP40126 519 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 NAGSQ8N159 534 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 PELI3Q8N2H9 469 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 TM9SF3Q9HD45 589 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 AGPAT4Q9NRZ5 378 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 DYRK3O43781 588 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CBFA2T3O75081 653 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 LATS1O95835 1130 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 PRG2P13727 222 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 IL12AP29459 219 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 OLR1P78380 273 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 PRR5P85299 388 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ELAVL3Q14576 367 aaKnown RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 COLEC12Q5KU26 742 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 KIAA1614Q5VZ46 1190 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CDC73Q6P1J9 531 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 COMMD6Q7Z4G1 85 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 FEVQ99581 238 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 SNTG1Q9NSN8 517 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CASKO14936 926 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 PEX11BO96011 259 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 CCDC159P0C7I6 412 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF26P17031 533 aaPredicted RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ZNHIT3Q15649 155 aaPredicted RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 GPR68Q15743 365 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 HTR3DQ70Z44 454 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 WDR48Q8TAF3 677 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 ZBP1Q9H171 429 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 DCSTAMPQ9H295 470 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 RC3H2Q9HBD1 1191 aaKnown RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 TAS2R9Q9NYW1 312 aa13.78□□□□□ -0.2
TMEM47-201ENST00000275954 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
TMEM47-201ENST00000275954 BTN3A2P78410 334 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 RAPSNQ13702 412 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 IQCCQ4KMZ1 466 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 KLHL35Q6PF15 583 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 GEMIN6Q8WXD5 167 aaKnown RBP13.77□□□□□ -0.2
TMEM47-201ENST00000275954 COX4I2Q96KJ9 171 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF347Q96SE7 839 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.2
TMEM47-201ENST00000275954 OR51V1Q9H2C8 321 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 PCDHB11Q9Y5F2 797 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 ST14Q9Y5Y6 855 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 ZNF831Q5JPB2 1677 aa13.77□□□□□ -0.2
TMEM47-201ENST00000275954 MT-ND2P03891 347 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 RPS3P23396 243 aaKnown RBP eCLIP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 STX4Q12846 297 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.21
TMEM47-201ENST00000275954 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
TMEM47-201ENST00000275954 CACTIN-AS1Q8N1I8 211 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms