RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 KLK1P06870 262 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 EBLN1P0CF75 366 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CDK2P24941 298 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 CSKP41240 450 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM198Q66K66 360 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ARMC5Q96C12 935 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-201ENST00000273317 KLRF1Q9NZS2 232 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 DKKL1Q9UK85 242 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 STUB1Q9UNE7 303 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 FOXO6A8MYZ6 492 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GALNT2Q10471 571 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 GPR68Q15743 365 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 ARHGAP12Q8IWW6 846 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHGA2Q9Y5H1 932 aa7.72□□□□□ -1.17
LIMD1-201ENST00000273317 A0A0G2JMP0 313 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PRSS51A0A1B0GVH4 220 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PTTG1O95997 202 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 BCHEP06276 602 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF182P17025 639 aaPredicted RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PFKLP17858 780 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 SLC25A11Q02978 314 aaKnown RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 DNASE1L3Q13609 305 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 CLEC20AQ6ZU45 233 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 TMED4Q7Z7H5 227 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 CARM1Q86X55 608 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 RNF130Q86XS8 419 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 OR4M2Q8NGB6 313 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 MYOCQ99972 504 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 FGFBP2Q9BYJ0 223 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 E7EQ34 232 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PRKCHP24723 683 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 DPP6P42658 865 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 CRHR2Q13324 411 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PAFAH1B3Q15102 231 aaKnown RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 GARNL3Q5VVW2 1013 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 SLC22A10Q63ZE4 541 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 NCBP2-AS2Q69YL0 99 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 OR4K17Q8NGC6 315 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 OR56A3Q8NH54 315 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 MAELQ96JY0 434 aaKnown RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM175Q9BSA9 504 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 DPEP3Q9H4B8 488 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 NKX1-2Q9UD57 310 aaPredicted RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 KLHL33A6NCF5 533 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 H3BSA7 217 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PPP1R11O60927 126 aaPredicted RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 AOC2O75106 756 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 UAP1L1Q3KQV9 507 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 RAB41Q5JT25 222 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 DCAF12L1Q5VU92 463 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 ZDHHC14Q8IZN3 488 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 SLC45A3Q96JT2 553 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PHOX2BQ99453 314 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 C11orf84Q9BUA3 381 aaPredicted RBP7.71□□□□□ -1.17
LIMD1-201ENST00000273317 CCDC32Q9BV29 185 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 COQ3Q9NZJ6 369 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 PCDHB3Q9Y5E6 796 aa7.71□□□□□ -1.17
LIMD1-201ENST00000273317 C13orf42A0A1B0GVH6 325 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CENPBD1B2RD01 187 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 MRPS14O60783 128 aaKnown RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 IGFBP4P22692 258 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 GSTM2P28161 218 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 GSTM4Q03013 218 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 NOGQ13253 232 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 LRRC32Q14392 662 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 GRIK5Q16478 980 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 HFE2Q6ZVN8 426 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 MTMR14Q8NCE2 650 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ADAM7Q9H2U9 754 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM45AQ9NWC5 275 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CSN2P05814 226 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 LRRC66Q68CR7 880 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF776Q68DI1 518 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 GDPD4Q6W3E5 623 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 SNX29P2Q8IUI4 249 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 METTL25Q8N6Q8 603 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 FOLH1BQ9HBA9 442 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ABCB8Q9NUT2 735 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 FARSAQ9Y285 508 aaKnown RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 NIPSNAP2O75323 286 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PENKP01210 267 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 IFNA5P01569 189 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 RORAP35398 523 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PRAMEF19Q5SWL8 479 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ZER1Q7Z7L7 766 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CERS5Q8N5B7 392 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 C1orf52Q8N6N3 182 aaKnown RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TSGA13Q96PP4 275 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TBX5Q99593 518 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 RNF19AQ9NV58 838 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM14AQ9Y6G1 99 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 LOC100509620A0A075B734 347 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CDC7O00311 574 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 LRRTM2O43300 516 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 HTRA2O43464 458 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PROM1O43490 865 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms