RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 PLEKHG7Q6ZR37 379 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 MCFD2Q8NI22 146 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 NXPE3Q969Y0 559 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 RSPRY1Q96DX4 576 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 DSN1Q9H410 356 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 C11orf49Q9H6J7 331 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 SCHIP1Q9P0W5 487 aaPredicted RBP18.28■□□□□ 0.52
CPNE7-201ENST00000268720 RNF6Q9Y252 685 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 RUVBL1Q9Y265 456 aaKnown RBP18.28■□□□□ 0.52
CPNE7-201ENST00000268720 INSL6Q9Y581 213 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 LAMA1P25391 3075 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 KNL1Q8NG31 2342 aa18.28■□□□□ 0.52
CPNE7-201ENST00000268720 TMEM229AB2RXF0 380 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 PRRT4C9JH25 899 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 RTCAO00442 366 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 KIAA0355O15063 1070 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CYP17A1P05093 508 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CISD3P0C7P0 127 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 SERPINB10P48595 397 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CLK1P49759 484 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 NKX2-5P52952 324 aaPredicted RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 NPRL3Q12980 569 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CAMK1Q14012 370 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 GRHL2Q6ISB3 625 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 GPR155Q7Z3F1 870 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CFAP206Q8IYR0 622 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 OR56A3Q8NH54 315 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 SPPL3Q8TCT6 385 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 VPS35Q96QK1 796 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 FAM83CQ9BQN1 747 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 GABARAPL1Q9H0R8 117 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 ABCG4Q9H172 646 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 FBXO8Q9NRD0 319 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 SNX8Q9Y5X2 465 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CKAP5Q14008 2032 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 A0A0G2JN53 185 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 H3BM21 787 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 IL1RNP18510 177 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 GTF2E2P29084 291 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 VIPR2P41587 438 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 LEXMQ3ZCV2 418 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 RPS26P11Q5JNZ5 115 aaPredicted RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 CPTPQ5TA50 214 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 BCDIN3DQ7Z5W3 292 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 FAM124AQ86V42 546 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 MEX3DQ86XN8 651 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 NFKBIDQ8NI38 313 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 OR2AG1Q9H205 316 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 DCSTAMPQ9H295 470 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 IL23AQ9NPF7 189 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 MARK1Q9P0L2 795 aa18.27■□□□□ 0.52
CPNE7-201ENST00000268720 EXO1Q9UQ84 846 aaKnown RBP18.27■□□□□ 0.52
CPNE7-201ENST00000268720 PCM1Q15154 2024 aa18.27■□□□□ 0.51
CPNE7-201ENST00000268720 OR2A25A4D2G3 310 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 MGAT4DA6NG13 374 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 OTOL1A6NHN0 477 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 SCAMP1O15126 338 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 SCAMP2O15127 329 aaKnown RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 STSP08842 583 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 GADD45AP24522 165 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 CD40LGP29965 261 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 HNF4AP41235 474 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 KCNJ10P78508 379 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 HOMEZQ8IX15 550 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 NFKBIL1Q9UBC1 381 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 PCDHGA6Q9Y5G7 932 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 WASHC1A8K0Z3 465 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 TBX1O43435 398 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 COQ9O75208 318 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 MYO1DO94832 1006 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 TBPL1P62380 186 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 SPIBQ01892 262 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 WASH2PQ6VEQ5 465 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 MSANTD1Q6ZTZ1 278 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 TSPYL5Q86VY4 417 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 FAM83FQ8NEG4 500 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 ATL1Q8WXF7 558 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 FAM120CQ9NX05 1096 aaKnown RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 SPASTQ9UBP0 616 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 DKK3Q9UBP4 350 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 PCYT1BQ9Y5K3 369 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 NME6O75414 186 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 C1orf105O95561 183 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 BMPR1AP36894 532 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 DBPQ10586 325 aaPredicted RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 SLCO4C1Q6ZQN7 724 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 TRAPPC5Q8IUR0 188 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 PHF10Q8WUB8 498 aaKnown RBP18.26■□□□□ 0.51
CPNE7-201ENST00000268720 COPS4Q9BT78 406 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 OR51E2Q9H255 320 aa18.26■□□□□ 0.51
CPNE7-201ENST00000268720 PCDH17O14917 1159 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 SUV39H1O43463 412 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 SEMG1P04279 462 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 IDSP22304 550 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 SLC6A11P48066 632 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 TPTEP56180 551 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 ZNF658BQ4V348 819 aaPredicted RBP18.25■□□□□ 0.51
CPNE7-201ENST00000268720 ERAP2Q6P179 960 aa18.25■□□□□ 0.51
CPNE7-201ENST00000268720 PRSS48Q7RTY5 328 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms