RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RNF208Q9H0X6 261 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CNTN3Q9P232 1028 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 DIRAS3O95661 229 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 OR8U9P0C7N5 309 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 TACR2P21452 398 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 OR1D2P34982 312 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 RPP30P78346 268 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 DYRK1AQ13627 763 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SIDT2Q8NBJ9 832 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 TMBIM1Q969X1 311 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 HMCESQ96FZ2 354 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CASC3O15234 703 aaKnown RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 SNAP29O95721 258 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 FNDC8Q8TC99 324 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 BEX2Q9BXY8 128 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 BEX1Q9HBH7 125 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 PRMT8Q9NR22 394 aaPredicted RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 PCDHB14Q9Y5E9 798 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 TOXO94900 526 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 SNAPINO95295 136 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 TNFP01375 233 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 PLP2Q04941 152 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 ZSWIM9Q86XI8 627 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 SLC15A3Q8IY34 581 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 CPT1BQ92523 772 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 FAM120CQ9NX05 1096 aaKnown RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 MGAT4BQ9UQ53 548 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 TRAPPC13A5PLN9 417 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 OR6C74A6NCV1 312 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 ATP6V1G2-DDX39BF2Z307 99 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 PRKYO43930 277 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 PEX14O75381 377 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 OXSR1O95747 527 aaPredicted RBP11.71□□□□□ -0.53
SRRM4-201ENST00000267260 BEX3Q00994 111 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 TUSC3Q13454 348 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 MFSD13AQ14CX5 517 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 CARD16Q5EG05 197 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 NEIL3Q8TAT5 605 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 NUS1Q96E22 293 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 ASF1BQ9NVP2 202 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 UTS2RQ9UKP6 389 aa11.71□□□□□ -0.53
SRRM4-201ENST00000267260 GPR33Q49SQ1 333 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 BANPQ8N9N5 519 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 OR4K17Q8NGC6 315 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 SDCBP2Q9H190 292 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 KLRF1Q9NZS2 232 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 IL36AQ9UHA7 158 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 SGCEO43556 437 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 CD6P30203 668 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 CDNFQ49AH0 187 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 PRAMEF13Q5VWM6 474 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 RASGRP3Q8IV61 690 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 Q9N2J8 555 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.54
SRRM4-201ENST00000267260 PENKP01210 267 aaPredicted RBP11.71□□□□□ -0.54
SRRM4-201ENST00000267260 AMY2BP19961 511 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 NTRK2Q16620 822 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 KIAA0930Q6ICG6 404 aaPredicted RBP11.71□□□□□ -0.54
SRRM4-201ENST00000267260 GLYATL2Q8WU03 294 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 HERVK_113Q902F9 699 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 MYOCQ99972 504 aa11.71□□□□□ -0.54
SRRM4-201ENST00000267260 ZFP37Q9Y6Q3 630 aaPredicted RBP11.71□□□□□ -0.54
SRRM4-201ENST00000267260 H0YAE9 185 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 CAPN5O15484 640 aaPredicted RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 RAC2P15153 192 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 TNFSF9P41273 254 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 C1orf94Q6P1W5 598 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 COL20A1Q9P218 1284 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 AHSA1O95433 338 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 KCNIP4Q6PIL6 250 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 CXCL17Q6UXB2 119 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 CCM2Q9BSQ5 444 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 ZNF821O75541 412 aaPredicted RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 SCGB1D1O95968 90 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 CDK1P06493 297 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 FRKP42685 505 aaPredicted RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 FRG2Q64ET8 278 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 DNAJC19Q96DA6 116 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 FRG2BQ96QU4 278 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 PTPN18Q99952 460 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 EBF2Q9HAK2 575 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 AMBNQ9NP70 447 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 ZCCHC3Q9NUD5 404 aaKnown RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 FAIMQ9NVQ4 179 aa11.7□□□□□ -0.54
SRRM4-201ENST00000267260 PAK1IP1Q9NWT1 392 aaPredicted RBP11.7□□□□□ -0.54
SRRM4-201ENST00000267260 MS4A12Q9NXJ0 267 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms