RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ZDHHC5Q9C0B5 715 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 DYRK4Q9NR20 520 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 TBC1D23Q9NUY8 699 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 NDRG4Q9ULP0 352 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 TDRKHQ9Y2W6 561 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 SH3PXD2BA1X283 911 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 KLHL33A6NCF5 533 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 OTOL1A6NHN0 477 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 KLHL18O94889 574 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 FADS2O95864 444 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MT-ND2P03891 347 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 IL3P08700 152 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 INHBBP09529 407 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MVDP53602 400 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MLLT10P55197 1068 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 SCARB2Q14108 478 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF234Q14588 700 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 TEAD4Q15561 434 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 FAM71E1Q6IPT2 247 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 CCDC71Q8IV32 467 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MMAAQ8IVH4 418 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PLA2G15Q8NCC3 412 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 UBE2FQ969M7 185 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 KCNC2Q96PR1 638 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MYNNQ9NPC7 610 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 RHBDL2Q9NX52 303 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MAP4K5Q9Y4K4 846 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 HSPE1-MOB4S4R3N1 261 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 J3QRK9 145 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 M0QX08 132 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 GPR37L1O60883 481 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 TNFRSF21O75509 655 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 JUNDP17535 347 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 ACADLP28330 430 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 KRT20P35900 424 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 MASP1P48740 699 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CCR3P51677 355 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 C21orf59P57076 290 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 RPP38P78345 283 aaKnown RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 SLC35A2P78381 396 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PHEXP78562 749 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 LRRC74AQ0VAA2 488 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 NPRL3Q12980 569 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PDE7AQ13946 482 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 ELAVL3Q14576 367 aaKnown RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 GAB4Q2WGN9 574 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CYP27C1Q4G0S4 372 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 Q6ZPB1 254 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 RNF130Q86XS8 419 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CACUL1Q86Y37 369 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 OR52N2Q8NGI0 321 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 OR2L2Q8NH16 312 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 GOT1L1Q8NHS2 421 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 RORBQ92753 470 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PPP1R16AQ96I34 528 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PADI2Q9Y2J8 665 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 C2orf16Q68DN1 1984 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 TNFRSF11BO00300 401 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CLPXO76031 633 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 NFATC1O95644 943 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PCCBP05166 539 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CD6P30203 668 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 OR1E2P47887 323 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 SELENOWP63302 87 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 SPIBQ01892 262 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 MOGQ16653 247 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 FAM180BQ6P0A1 224 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 TMC5Q6UXY8 1006 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 VN1R5Q7Z5H4 357 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 FAM124AQ86V42 546 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 ANKRD13BQ86YJ7 626 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 GJD3Q8N144 294 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 TAMM41Q96BW9 452 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 LINC00615Q96LM1 132 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-201ENST00000266679 PITX2Q99697 317 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms