RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 H2AFYO75367 372 aaKnown RBP9.12□□□□□ -0.95
VPS41-201ENST00000265745 UNC5CO95185 931 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 C1GALT1C1LP0DN25 315 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 RNH1P13489 461 aaKnown RBP9.12□□□□□ -0.95
VPS41-201ENST00000265745 GNAZP19086 355 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 SSTR1P30872 391 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 SLC6A12P48065 614 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ST13P50502 369 aaKnown RBP9.12□□□□□ -0.95
VPS41-201ENST00000265745 TGFBIQ15582 683 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 OR1C1Q15619 314 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
VPS41-201ENST00000265745 C1QL3Q5VWW1 255 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 QSOX2Q6ZRP7 698 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 FJX1Q86VR8 437 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ZNF295-AS1Q8N0V1 137 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 LGI4Q8N135 537 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 SPATA6LQ8N4H0 392 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 SPATA4Q8NEY3 305 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 RNF166Q96A37 237 aaPredicted RBP9.12□□□□□ -0.95
VPS41-201ENST00000265745 SIGLEC12Q96PQ1 595 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ERP44Q9BS26 406 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 CAB39LQ9H9S4 337 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ANKRD10Q9NXR5 420 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 WHRNQ9P202 907 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 SEC14L3Q9UDX4 400 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 DOCK10Q96BY6 2186 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 MDC1Q14676 2089 aaKnown RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 TCRBV9S1A1TA0A576 114 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TCRBV16S1A1N1A0A5B0 115 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 LRIT2A6NDA9 550 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 GABRR3A8MPY1 467 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 PSMD12O00232 456 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 EIF3HO15372 352 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS41-201ENST00000265745 TAPBPO15533 448 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 PRAMEF4O60810 478 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NEURL1O76050 574 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 WDR47O94967 919 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 C1QAP02745 245 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CCDC166P0CW27 439 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 MAOAP21397 527 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 GGT5P36269 586 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 SLC12A2P55011 1212 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TAS2R50P59544 299 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 STXBP1P61764 594 aaKnown RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 BTN3A2P78410 334 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 PMP22Q01453 160 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TOR1AIP1Q5JTV8 583 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CDKL4Q5MAI5 379 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 PRAMEF9Q5VWM5 478 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TMIGD1Q6UXZ0 262 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 FRA10AC1Q70Z53 315 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 RPS19BP1Q86WX3 136 aaKnown RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 LURAP1LQ8IV03 231 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS41-201ENST00000265745 CYP4X1Q8N118 509 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CA13Q8N1Q1 262 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 KIF2BQ8N4N8 673 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NFAM1Q8NET5 270 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 TTLQ8NG68 377 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 CDKL2Q92772 493 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TSPAN17Q96FV3 270 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 SCMH1Q96GD3 660 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 SEC16BQ96JE7 1060 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CPNE1Q99829 537 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CAPS2Q9BXY5 557 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 HES7Q9BYE0 225 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 UNKQ9C0B0 810 aaKnown RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 PITHD1Q9GZP4 211 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 DPH5Q9H2P9 285 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 RHBGQ9H310 441 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CDCP1Q9H5V8 836 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 NT5DC2Q9H857 520 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 TRIM45Q9H8W5 580 aaPredicted RBP9.11□□□□□ -0.95
VPS41-201ENST00000265745 SAYSD1Q9NPB0 183 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 KLHL1Q9NR64 748 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 GPRC5BQ9NZH0 403 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 GRHL1Q9NZI5 618 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 COPG2Q9UBF2 871 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 CENPEQ02224 2701 aa9.11□□□□□ -0.95
VPS41-201ENST00000265745 PCM1Q15154 2024 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 HEATR5BQ9P2D3 2071 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TRGV8A0A0C4DH27 118 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 ASPDHA6ND91 283 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 SAGE2PA6NJ88 616 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 FAM159BA6NKW6 160 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 PHGDHO43175 533 aaKnown RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 RAD51CO43502 376 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 CLEC3AO75596 197 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TBX6O95947 436 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 SP1P08047 785 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 CD1DP15813 335 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 STMN1P16949 149 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 GSTM2P28161 218 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms