RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 JUPP14923 745 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SDC2P34741 201 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CNR2P34972 360 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SOX3P41225 446 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 FAM189BP81408 668 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ACSM2AQ08AH3 577 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TMEM201Q5SNT2 666 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ACSM2BQ68CK6 577 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 METAP1DQ6UB28 335 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 NPAS3Q8IXF0 933 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 NANOGP1Q8N7R0 232 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SH3KBP1Q96B97 665 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SPATA17Q96L03 361 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 COPS8Q99627 209 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 RBFOX1Q9NWB1 397 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PCDHB9Q9Y5E1 797 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PCDHGB7Q9Y5F8 929 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PRSS21Q9Y6M0 314 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 A0A0X1KG70 313 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TLR4O00206 839 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 MYL12BO14950 172 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GPR39O43194 453 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ORC5O43913 435 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 UGDHO60701 494 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CSO75390 466 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 C1QCP02747 245 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CSF2P04141 144 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 RPLP2P05387 115 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 LAMP1P11279 417 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ACADMP11310 421 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GRK4P32298 578 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GPC1P35052 558 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PPP3R1P63098 170 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GCNT6Q5T4J0 391 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 LIPJQ5W064 366 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 MBOAT1Q6ZNC8 495 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 UBE2R2Q712K3 238 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CHST9Q7L1S5 443 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CAMKMTQ7Z624 323 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 NAGSQ8N159 534 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 CLDN19Q8N6F1 224 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 KLHDC9Q8NEP7 349 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC12A9Q9BXP2 914 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 UCK2Q9BZX2 261 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 PAK6Q9NQU5 681 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TMPRSS11EQ9UL52 423 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 PLA2G10O15496 165 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 FZD6O60353 706 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 TPST2O60704 377 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ENTPD6O75354 484 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 AP2A2O94973 939 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 UBL4AP11441 157 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF30P17039 623 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 NAT1P18440 290 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 RHCEP18577 417 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 POLR2CP19387 275 aaPredicted RBP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 CRATP43155 626 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 XCR1P46094 333 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 LIMS1P48059 325 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 HNRNPA0Q13151 305 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF782Q6ZMW2 699 aaPredicted RBP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 AQP11Q8NBQ7 271 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 MAL2Q969L2 176 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 KCTD7Q96MP8 289 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ZFYVE1Q9HBF4 777 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 PLXNA3P51805 1871 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 A0A0B4J293 547 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 H3BNC9 293 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 M0R129 80 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 PDHXO00330 501 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC43A1O75387 559 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 GCM2O75603 506 aaPredicted RBP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 HSD3B1P14060 373 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 MYL12AP19105 171 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 HSD3B2P26439 372 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC6A4P31645 630 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 SCARB2Q14108 478 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 HDDC2Q7Z4H3 204 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 AMIGO1Q86WK6 493 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC30A8Q8IWU4 369 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 PHC2Q8IXK0 858 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC38A6Q8IZM9 456 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 484 ms