RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 FRMD6Q96NE9 622 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 SARGQ9BW04 601 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CNOT10Q9H9A5 744 aaKnown RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 PRTFDC1Q9NRG1 225 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 PPT2Q9UMR5 302 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 MMACHCQ9Y4U1 282 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 OARD1Q9Y530 152 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 SPACA6W5XKT8 324 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 A0A0G2JN53 185 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ASPDHA6ND91 283 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 NME2P1O60361 137 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 NEURL1O76050 574 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF37AP17032 561 aaPredicted RBP11.46□□□□□ -0.57
TRAF4-202ENST00000262396 NME2P22392 152 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 PTGS2P35354 604 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 MEOX1P50221 254 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 PLA2G16P53816 162 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 MLF1P58340 268 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 GNG11P61952 73 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 HSF1Q00613 529 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 STX4Q12846 297 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
TRAF4-202ENST00000262396 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 SLBPQ14493 270 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF460Q14592 562 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 TSNQ15631 228 aaKnown RBP11.46□□□□□ -0.57
TRAF4-202ENST00000262396 PAOXQ6QHF9 649 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 TMIGD1Q6UXZ0 262 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 C3P1Q6ZMU1 363 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 CA13Q8N1Q1 262 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 TCAIMQ8N3R3 496 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ANKRD53Q8N9V6 530 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 BBOF1Q8ND07 529 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 B3GNT7Q8NFL0 401 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 ADAMTS18Q8TE60 1221 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 SLCO2A1Q92959 643 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 VMP1Q96GC9 406 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 PDLIM2Q96JY6 352 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 SPNS1Q9H2V7 528 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 NECTIN3Q9NQS3 549 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 MEMO1Q9Y316 297 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 CLCA3PQ9Y6N3 262 aa11.46□□□□□ -0.57
TRAF4-202ENST00000262396 MYO7BQ6PIF6 2116 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 TCRBV16S1A1N1A0A5B0 115 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SYNDIG1LA6NDD5 238 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 A8MVJ9 347 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 ACOT7O00154 380 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 PEX1O43933 1283 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 DNAJB6O75190 326 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 ZFAND5O76080 213 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 AGAP20933 346 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 GSTM2P28161 218 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 RFC3P40938 356 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 GDF5P43026 501 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SSR4P51571 173 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 CDKL1Q00532 357 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SBSNQ6UWP8 590 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 CLNKQ7Z7G1 428 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 GPSM1Q86YR5 675 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.45□□□□□ -0.587e-7■■■■□ 26.3
TRAF4-202ENST00000262396 KLHDC8AQ8IYD2 350 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 ZBED8Q8IZ13 594 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 FAM47BQ8NA70 645 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 PYROXD1Q8WU10 500 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 ASB15Q8WXK1 588 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 ANKRD7Q92527 254 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 EXT2Q93063 718 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SDCCAG3Q96C92 435 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 KRT12Q99456 494 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 NPAS2Q99743 824 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 NPLQ9BXD5 320 aaPredicted RBP11.45□□□□□ -0.58
TRAF4-202ENST00000262396 REXO4Q9GZR2 422 aaKnown RBP11.45□□□□□ -0.58
TRAF4-202ENST00000262396 DNAJC11Q9NVH1 559 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 CD274Q9NZQ7 290 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 SAR1BQ9Y6B6 198 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 TEX264Q9Y6I9 313 aa11.45□□□□□ -0.58
TRAF4-202ENST00000262396 CCDC188H7C350 402 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 DYRK3O43781 588 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 ITGA10O75578 1167 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 PDE9AO76083 593 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 SSTR2P30874 369 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 HSD17B7P56937 341 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 RAB38P57729 211 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 TAS2R39P59534 338 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 GPR85P60893 370 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 ADORA2A-AS1P86434 159 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 XKR6Q5GH73 641 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 PAGE2BQ5JRK9 111 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 ZNF468Q5VIY5 522 aaPredicted RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 STEAP4Q687X5 459 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms