RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PCDH1Q08174 1060 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 KEAP1Q14145 624 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 PLPP4Q5VZY2 271 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 VTCN1Q7Z7D3 282 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 GALNT12Q8IXK2 581 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 UBQLNLQ8IYU4 475 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 OR56A3Q8NH54 315 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 SH3KBP1Q96B97 665 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 SGK2Q9HBY8 427 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 RAD18Q9NS91 495 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 ADPRHL2Q9NX46 363 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 FBXL12Q9NXK8 326 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 ITM2BQ9Y287 266 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 IRAK3Q9Y616 596 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 QSOX1O00391 747 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 ATG13O75143 517 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 SH3BGRLO75368 114 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 KDELR2P33947 212 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 IL1RL1Q01638 556 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 TMEM115Q12893 351 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-201ENST00000261963 OR2T5Q6IEZ7 315 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 LIPIQ6XZB0 460 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 NLGN4XQ8N0W4 816 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 OR2T29Q8NH02 315 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 APOL4Q9BPW4 351 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 CCM2Q9BSQ5 444 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 NXF2Q9GZY0 626 aaKnown RBP21.69■■□□□ 1.06
MCF2L-201ENST00000261963 SAGE1Q9NXZ1 904 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 MARK1Q9P0L2 795 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 GULP1Q9UBP9 304 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 PCDHGB6Q9Y5F9 930 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 GMPPBQ9Y5P6 360 aa21.69■■□□□ 1.06
MCF2L-201ENST00000261963 SCAMP2O15127 329 aaKnown RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 CRYZL1O95825 349 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 CATP04040 527 aaKnown RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 VLDLRP98155 873 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 GRIN2CQ14957 1233 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 SMN1Q16637 294 aaKnown RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 SYT16Q17RD7 645 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 ARHGAP15Q53QZ3 475 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 C1orf52Q8N6N3 182 aaKnown RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 EHD3Q9NZN3 535 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 MAU2Q9Y6X3 613 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 DIRAS1O95057 198 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 HSD3B1P14060 373 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 XPAP23025 273 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 HSD3B2P26439 372 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 HTRA4P83105 476 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-201ENST00000261963 GTF2H3Q13889 308 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 TRIM63Q969Q1 353 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 AP2M1Q96CW1 435 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 NUAK2Q9H093 628 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 BRF2Q9HAW0 419 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 NOTCH4Q99466 2003 aa21.68■■□□□ 1.06
MCF2L-201ENST00000261963 GABRR3A8MPY1 467 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 hCG_2039718K7EN88 272 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 CCRL2O00421 344 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 SNX4O95219 450 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 ABCB1P08183 1280 aaPredicted RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 ENDOUP21128 410 aaKnown RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 NNMTP40261 264 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 DAPP51397 102 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 ZNF658BQ4V348 819 aaPredicted RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 ERICH5Q6P6B1 374 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 TMEM220Q6QAJ8 160 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 PARS2Q7L3T8 475 aaKnown RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 MRPL43Q8N983 215 aaKnown RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 OR7G3Q8NG95 312 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 IPCEF1Q8WWN9 437 aaPredicted RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 DUSP26Q9BV47 211 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 MKLN1Q9UL63 735 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 PCDHB11Q9Y5F2 797 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 FGF19O95750 216 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 ELFN1P0C7U0 828 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 LIPAP38571 399 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 SNAP47Q5SQN1 464 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 HUS1BQ8NHY5 278 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 METTL2AQ96IZ6 378 aaKnown RBP21.67■■□□□ 1.06
MCF2L-201ENST00000261963 SAMD11Q96NU1 681 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 TPT1P8Q9HAU6 139 aa21.67■■□□□ 1.06
MCF2L-201ENST00000261963 DSCR3O14972 297 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 NUDT7P0C024 238 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 PBLDP30039 288 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CBLL1Q75N03 491 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 SYNPOQ8N3V7 929 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CPA6Q8N4T0 437 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CHTF18Q8WVB6 975 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 HSH2DQ96JZ2 352 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CDADC1Q9BWV3 514 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CHST8Q9H2A9 424 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 SLA2Q9H6Q3 261 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 RAPGEFL1Q9UHV5 662 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 RNF6Q9Y252 685 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 PEX16Q9Y5Y5 336 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 PNMA8CA0A1B0GUJ8 204 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 FABP3P05413 133 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 ANXA4P09525 319 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-201ENST00000261963 DDOSTP39656 456 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 CTSKP43235 329 aa21.66■■□□□ 1.06
MCF2L-201ENST00000261963 METAP1P53582 386 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms