RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DUSP7Q16829 419 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 OR2G6Q5TZ20 316 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
SNX1-201ENST00000261889 TMPRSS11BQ86T26 416 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 TRBV4-1A0A0J9YWV2 114 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 MGAT4DA6NG13 374 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 CENPXA8MT69 81 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 CDRT1O95170 752 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 RAB8AP61006 207 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 MAD2L1Q13257 205 aaPredicted RBP12.47□□□□□ -0.41
SNX1-201ENST00000261889 DEF8Q6ZN54 512 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 C11orf96Q7Z7L8 435 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 ART5Q96L15 291 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 OR2A14Q96R47 310 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 CDCP1Q9H5V8 836 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 SGK2Q9HBY8 427 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 NRG2O14511 850 aaPredicted RBP12.46□□□□□ -0.41
SNX1-201ENST00000261889 DVL2O14641 736 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 IGLV3-27P01718 113 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ALDH9A1P49189 494 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 GPLD1P80108 840 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 PRSS53Q2L4Q9 553 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CBLL1Q75N03 491 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ASCC1Q8N9N2 400 aaKnown RBP12.46□□□□□ -0.41
SNX1-201ENST00000261889 RAET1EQ8TD07 263 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 HRASLS5Q96KN8 279 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 COMMD3Q9UBI1 195 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 SNX11Q9Y5W9 270 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 LTBP2Q14767 1821 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 A0A1B0GVM2 712 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 OR6C70A6NIJ9 312 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 SCN2BO60939 215 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CYP17A1P05093 508 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CD70P32970 193 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 GGT2P36268 569 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CD79BP40259 229 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
SNX1-201ENST00000261889 RPS13P62277 151 aaKnown RBP12.46□□□□□ -0.41
SNX1-201ENST00000261889 CNTN1Q12860 1018 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
SNX1-201ENST00000261889 RGNQ15493 299 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 SPATS1Q496A3 300 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 IQCCQ4KMZ1 466 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 FAM209AQ5JX71 171 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 HECTD3Q5T447 861 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 CPTPQ5TA50 214 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ARMCX6Q7L4S7 300 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 NXPE1Q8N323 547 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 ST6GAL2Q96JF0 529 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
SNX1-201ENST00000261889 LAMA1P25391 3075 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 CLDN24A6NM45 220 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 ADAMDEC1O15204 470 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 CLDN11O75508 207 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 PDHA2P29803 388 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 CLCN4P51793 760 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 ITGA1P56199 1179 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 ZNF181Q2M3W8 571 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 C17orf50Q8WW18 174 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.42
SNX1-201ENST00000261889 MAGIXQ9H6Y5 334 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 RPS6KA6Q9UK32 745 aa12.46□□□□□ -0.42
SNX1-201ENST00000261889 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 TMCC2O75069 709 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 PRKCAP17252 672 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
SNX1-201ENST00000261889 ZNF79Q15937 498 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 FBXO46Q6PJ61 603 aaPredicted RBP12.45□□□□□ -0.42
SNX1-201ENST00000261889 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 WDR48Q8TAF3 677 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 UCN3Q969E3 161 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 MYDGFQ969H8 173 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 YIPF4Q9BSR8 244 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 WDFY3Q8IZQ1 3526 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 A0A0B4J293 547 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 ZNF623O75123 536 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 CH25HO95992 272 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 OPRD1P41143 372 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 PTPN5P54829 565 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 DEFA1P59665 94 aa12.45□□□□□ -0.42
SNX1-201ENST00000261889 DEFA3P59666 94 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms