RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PSORS1C1Q9UIG5 152 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CLDN24A6NM45 220 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ARHGEF33A8MVX0 844 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SOX14O95416 240 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CBSLP0DN79 551 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 IGFBP4P22692 258 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CBSP35520 551 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC6A12P48065 614 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 HNMTP50135 292 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 MXD1Q05195 221 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 RAB33AQ14088 237 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF362Q5T0B9 420 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 GALNT13Q8IUC8 556 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 TCAIMQ8N3R3 496 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ASZ1Q8WWH4 475 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC35A5Q9BS91 424 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 C11orf16Q9NQ32 467 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ERVW-1Q9UQF0 538 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 BACE2Q9Y5Z0 518 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CKAP5Q14008 2032 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SMIM30A4D0T7 59 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 H3BM21 787 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 TFECO14948 347 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 DSCR3O14972 297 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF821O75541 412 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 TCEA1P23193 301 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 GGT2P36268 569 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SPINT3P49223 89 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 LEXMQ3ZCV2 418 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 C10orf62Q5T681 223 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 FAHD1Q6P587 224 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 MINDY2Q8NBR6 621 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 B3GNT7Q8NFL0 401 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 VANGL1Q8TAA9 524 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 SORCS1Q8WY21 1168 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 CNPPD1Q9BV87 410 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 ZDHHC4Q9NPG8 344 aa13.89□□□□□ -0.19
SFSWAP-201ENST00000261674 LOC110117498-PIK3R3F6TDL0 507 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 SCAMP2O15127 329 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TSPAN6O43657 245 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 KIAA0513O60268 411 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 APOA1P02647 267 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ADORA3P0DMS8 318 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 HOXB9P17482 250 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 XPAP23025 273 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RPS26P62854 115 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TEAD2Q15562 447 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TMEM150AQ86TG1 271 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RNF130Q86XS8 419 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 UBE2J2Q8N2K1 259 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 OR7G3Q8NG95 312 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 STARD8Q92502 1023 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 FAM83DQ9H4H8 585 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ADAMDEC1O15204 470 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 SOCS5O75159 536 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 CCNKO75909 580 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 CDK1P06493 297 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 C1SP09871 688 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 PDHA2P29803 388 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RECQLP46063 649 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 SELENOWP63302 87 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 MTAPQ13126 283 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 SCARB2Q14108 478 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF385BQ569K4 471 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 SYNPOQ8N3V7 929 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 ZSWIM3Q96MP5 696 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 BCL7BQ9BQE9 202 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 PSD2Q9BQI7 771 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RIOK2Q9BVS4 552 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 LINC01565O15544 149 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 RGS6P49758 472 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TUBA1BP68363 451 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TAB1Q15750 504 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 DEPDC1Q5TB30 811 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 UBE2UQ5VVX9 321 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 TUBA1AQ71U36 451 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 OR8J2Q8NGG1 315 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 EMILIN2Q9BXX0 1053 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 IFT52Q9Y366 437 aa13.88□□□□□ -0.19
SFSWAP-201ENST00000261674 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms