RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 URB1O60287 2271 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 DAPL1A0PJW8 107 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TTC24A2A3L6 582 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR5F1O95221 314 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PCGF2P35227 344 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TAZQ16635 292 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NRF1Q16656 503 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF829Q3KNS6 432 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TECRLQ5HYJ1 363 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZSCAN4Q8NAM6 433 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NPLOC4Q8TAT6 608 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MYADMQ96S97 322 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MED17Q9NVC6 651 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RNF186Q9NXI6 227 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SCP2D1Q9UJQ7 156 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 UTS2RQ9UKP6 389 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MYO7AQ13402 2215 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FER1L6Q2WGJ9 1857 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ACOT7O00154 380 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 METTL18O95568 372 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ADAP00813 363 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PTHP01270 115 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 IFNA7P01567 189 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 EIF2B2P49770 351 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CATSPEREQ5SY80 951 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 GK5Q6ZS86 529 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RASSF6Q6ZTQ3 369 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 KIAA0907Q7Z7F0 614 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PQLC3Q8N755 202 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR4K17Q8NGC6 315 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CEP76Q8TAP6 659 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 UBTD2Q8WUN7 234 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FCRL4Q96PJ5 515 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MAT2BQ9NZL9 334 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SCAF4O95104 1147 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SYN1P17600 705 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MAP3K8P41279 467 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ATP12AP54707 1039 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PTGR1Q14914 329 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TLDC1Q6P9B6 456 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FRRS1Q6ZNA5 592 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR8J1Q8NGP2 316 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PHYHIPQ92561 330 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MTFMTQ96DP5 389 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NPAS2Q99743 824 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 C7orf50Q9BRJ6 194 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ITPAQ9BY32 194 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MTMR10Q9NXD2 777 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 GPR160Q9UJ42 338 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FCF1Q9Y324 198 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 USP3Q9Y6I4 520 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SEC14L5O43304 696 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF208O43345 1280 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LINGO3P0C6S8 592 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 GSTT2P0CG29 244 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CLUP10909 449 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MAP2K4P45985 399 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CXCR4P61073 352 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 KCNJ2P63252 427 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 UGT3A2Q3SY77 523 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LCN8Q6JVE9 175 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RFWD3Q6PCD5 774 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NXPE4Q6UWF7 544 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SHFQ7M4L6 423 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 KCTD20Q7Z5Y7 419 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SMG8Q8ND04 991 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TESCQ96BS2 214 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FAM136AQ96C01 138 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 C1GALT1C1Q96EU7 318 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ADAM33Q9BZ11 813 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CCM2LQ9NUG4 571 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FZD4Q9ULV1 537 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 M0QX08 132 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TLR4O00206 839 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NDUFS4O43181 175 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 COCHO43405 550 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PLP2Q04941 152 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 DBPQ10586 325 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PTPRCAPQ14761 206 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR2T33Q8NG76 320 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SLC9A6Q92581 669 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 HDAC8Q9BY41 377 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 AKTIPQ9H8T0 292 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ARMC1Q9NVT9 282 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RGS17Q9UGC6 210 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM98Q9Y2Y6 226 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SCN9AQ15858 1988 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NAP1L6A6NFF2 107 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 IFNA21P01568 189 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RHOP08100 348 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 HOXD13P35453 343 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SPINT3P49223 89 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 AP2S1P53680 142 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SMAD1Q15797 465 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RSPO2Q6UXX9 243 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF554Q86TJ5 538 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SERPINA11Q86U17 422 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FITM2Q8N6M3 262 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms