RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 FIGLAQ6QHK4 219 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 SPATA19Q7Z5L4 167 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF595Q8IYB9 648 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF713Q8N859 430 aaPredicted RBP4.35□□□□□ -1.71
TRA2B-201ENST00000259043 SLC4A11Q8NBS3 891 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ATP8B4Q8TF62 1192 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 EXT2Q93063 718 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF689Q96CS4 500 aaPredicted RBP4.35□□□□□ -1.71
TRA2B-201ENST00000259043 MTERF3Q96E29 417 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 RPGRIP1Q96KN7 1286 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 LRR1Q96L50 414 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 CCDC43Q96MW1 224 aaKnown RBP4.35□□□□□ -1.71
TRA2B-201ENST00000259043 SLC22A12Q96S37 553 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 TUBB2BQ9BVA1 445 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 EGLN1Q9GZT9 426 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 S1PR5Q9H228 398 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 CHMP4BQ9H444 224 aaKnown RBP4.35□□□□□ -1.71
TRA2B-201ENST00000259043 HHATLQ9HCP6 504 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 PRMT7Q9NVM4 692 aaPredicted RBP4.35□□□□□ -1.71
TRA2B-201ENST00000259043 C2orf42Q9NWW7 574 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 SNX7Q9UNH6 387 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 C2CD2Q9Y426 696 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 JRKLQ9Y4A0 524 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 YIPF1Q9Y548 306 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 PLIN4Q96Q06 1357 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 MAST4O15021 2626 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 MIA3Q5JRA6 1907 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 A0A1B0GU03 582 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 RSPH10B2B2RC85 870 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 H0YAE9 185 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 NR5A2O00482 541 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 CLDN4O14493 209 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 IFIT3O14879 490 aaKnown RBP4.34□□□□□ -1.71
TRA2B-201ENST00000259043 TO15178 435 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 PI15O43692 258 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 NR3C1P04150 777 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 RAB40ALP0C0E4 278 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 DANCRP0C864 163 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 RSPH10BP0C881 870 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF286BP0CG31 522 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 NOVP48745 357 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ASCL1P50553 236 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 YWHAHQ04917 246 aaPredicted RBP4.34□□□□□ -1.71
TRA2B-201ENST00000259043 SLMAPQ14BN4 828 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 DUOXA1Q1HG43 343 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 GCNT6Q5T4J0 391 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 C20orf194Q5TEA3 1177 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ZC2HC1BQ5TFG8 222 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ALS2CLQ60I27 953 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 IYDQ6PHW0 289 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 RAPH1Q70E73 1250 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 SERINC5Q86VE9 423 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ITPRIPQ8IWB1 547 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 CCDC170Q8IYT3 715 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 ADAD2Q8NCV1 583 aaKnown RBP4.34□□□□□ -1.71
TRA2B-201ENST00000259043 MOSPD2Q8NHP6 518 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 C9orf43Q8TAL5 461 aaPredicted RBP4.34□□□□□ -1.71
TRA2B-201ENST00000259043 SMPDL3BQ92485 455 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 FAM81BQ96LP2 452 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 SFXN2Q96NB2 322 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 MLPHQ9BV36 600 aaPredicted RBP4.34□□□□□ -1.71
TRA2B-201ENST00000259043 IL1RAPL2Q9NP60 686 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 CCPG1Q9ULG6 757 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 EXOC6BQ9Y2D4 811 aa4.34□□□□□ -1.71
TRA2B-201ENST00000259043 NBEAQ8NFP9 2946 aa4.34□□□□□ -1.72
TRA2B-201ENST00000259043 SPEGQ15772 3267 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 ASH1LQ9NR48 2969 aaKnown RBP4.33□□□□□ -1.72
TRA2B-201ENST00000259043 ITPR1Q14643 2758 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
TRA2B-201ENST00000259043 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 PATJQ8NI35 1801 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 ADGRA3Q8IWK6 1321 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 A0A087X002 238 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 A0A0U1RQK1 487 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 ZNF320A2RRD8 509 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 TRIM64A6NGJ6 449 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 TRIM64BA6NI03 449 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 PLK4O00444 970 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 XRCC3O43542 346 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 NMT2O60551 498 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 BMP10O95393 424 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 GH1P01241 217 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 GBAP04062 536 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 VIMP08670 466 aaKnown RBP4.33□□□□□ -1.72
TRA2B-201ENST00000259043 KRT19P08727 400 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 OR2T7P0C7T2 308 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 RNF224P0DH78 156 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 PTMSP20962 102 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 CALML3P27482 149 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 SLC1A4P43007 532 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 NAGLUP54802 743 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 CD81P60033 236 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 RPS6P62753 249 aaKnown RBP4.33□□□□□ -1.72
TRA2B-201ENST00000259043 PLA2G7Q13093 441 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 MORF4L2Q15014 288 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 NHSL2Q5HYW2 709 aa4.33□□□□□ -1.72
TRA2B-201ENST00000259043 CENPQQ7L2Z9 268 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms