RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TARDBPQ13148 414 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 PWP1Q13610 501 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 KIR2DS3Q14952 304 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 MAPKAPK3Q16644 382 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 HKDC1Q2TB90 917 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SAMD4BQ5PRF9 694 aaKnown RBP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 DEPDC1Q5TB30 811 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 C17orf82Q86X59 251 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 CACTIN-AS1Q8N1I8 211 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 Q8N9G6 341 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 OR7A2PQ8NGA2 310 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 CDC26Q8NHZ8 85 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 DNAJB14Q8TBM8 379 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 CREB3L4Q8TEY5 395 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 F2RL3Q96RI0 385 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SARGQ9BW04 601 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SORBS1Q9BX66 1292 aaKnown RBP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SYNPO2LQ9H987 977 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 SERHLQ9NQF3 203 aa16.64■□□□□ 0.25
SRSF1-201ENST00000258962 EXO1Q9UQ84 846 aaKnown RBP16.64■□□□□ 0.25
SRSF1-201ENST00000258962 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 OR6C74A6NCV1 312 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 PLPP1O14494 284 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 SCAMP2O15127 329 aaKnown RBP16.63■□□□□ 0.25
SRSF1-201ENST00000258962 CLEC3AO75596 197 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 GBAP04062 536 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 UGT2B7P16662 529 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 TCN1P20061 433 aaPredicted RBP16.63■□□□□ 0.25
SRSF1-201ENST00000258962 GRIA3P42263 894 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 ASMTP46597 345 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 ZNF763Q0D2J5 394 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 SPIDRQ14159 915 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 PGS1Q32NB8 556 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 RABL3Q5HYI8 236 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 NANOGP8Q6NSW7 305 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 AAGABQ6PD74 315 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 TRIM73Q86UV7 250 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 PAQR7Q86WK9 346 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 MARCH9Q86YJ5 346 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 OR10G6Q8NH81 332 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 SLC22A18Q96BI1 424 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 AICDAQ9GZX7 198 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 NANOGQ9H9S0 305 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 ACTR10Q9NZ32 417 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 MCM8Q9UJA3 840 aa16.63■□□□□ 0.25
SRSF1-201ENST00000258962 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 H0Y3Z8 333 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 NDUFS4O43181 175 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 KCNH1O95259 989 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 KLK1P06870 262 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 HOXB9P17482 250 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 POLR2CP19387 275 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 HRH2P25021 359 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 ALDH4A1P30038 563 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 WNT3P56703 355 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 CCL7P80098 99 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 ZIC1Q15915 447 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 DPY19L1Q2PZI1 675 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 C6orf10Q5SRN2 563 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 CDCP2Q5VXM1 449 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 OR4F3Q6IEY1 312 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 RBM44Q6ZP01 1051 aaKnown RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 TMEM26Q6ZUK4 368 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 UBE3DQ7Z6J8 389 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 MSRB3Q8IXL7 192 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 AVL9Q8NBF6 648 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 ASB9Q96DX5 294 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 PPM1MQ96MI6 270 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 GFM1Q96RP9 751 aaKnown RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 CGREF1Q99674 301 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 REXO4Q9GZR2 422 aaKnown RBP16.62■□□□□ 0.25
SRSF1-201ENST00000258962 MYNNQ9NPC7 610 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 LHX9Q9NQ69 397 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 STOML1Q9UBI4 398 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 SNX7Q9UNH6 387 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 MAN2B2Q9Y2E5 1009 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 PTPRBP23467 1997 aa16.62■□□□□ 0.25
SRSF1-201ENST00000258962 TRBV5-3A0A0A0MS03 114 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 C15orf38-AP3S2A0A0A6YYH1 394 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 BCAS2O75934 225 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 RPLP0P05388 317 aaKnown RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 PIM1P11309 404 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 HSD17B1P14061 328 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 COX7A2P14406 83 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 TPP2P29144 1249 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 BSGP35613 385 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 GRK3P35626 688 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 KIR3DL1P43629 444 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 GPR3P46089 330 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 AP2B1P63010 937 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 HHEXQ03014 270 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 SRSF11Q05519 484 aaKnown RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 SELPLGQ14242 412 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 FLOT2Q14254 428 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 TRIM25Q14258 630 aaKnown RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 RCN1Q15293 331 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 ANKRD26P1Q6NSI1 321 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms