RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZNF420Q8TAQ5 688 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 EZH1Q92800 747 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 RAD51AP1Q96B01 352 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 DGCR6LQ9BY27 220 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 MAP4K5Q9Y4K4 846 aa17.89■□□□□ 0.45
PDLIM4-201ENST00000253754 PCDH8O95206 1070 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 JUNBP17275 347 aaPredicted RBP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 CAMK2GQ13555 558 aaPredicted RBP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 RFX4Q33E94 735 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 FAM129CQ86XR2 697 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 DCUN1D3Q8IWE4 304 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 ATG16L2Q8NAA4 619 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 CXorf40BQ96DE9 158 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 TUBA1CQ9BQE3 449 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 REEP1Q9H902 201 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 KIF17Q9P2E2 1029 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 CORO2BQ9UQ03 480 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 FEZF1A0PJY2 475 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 C2CD4DB7Z1M9 353 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 LATO43561 262 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 TNFRSF21O75509 655 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 KELP23276 732 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 PPIBP23284 216 aaKnown RBP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 GSTM2P28161 218 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 CCR3P51677 355 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 HPCAP84074 193 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 SLC5A12Q1EHB4 618 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 C2orf27AQ580R0 203 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 AGBL4Q5VU57 503 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 ZBTB46Q86UZ6 589 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 LRRTM4Q86VH4 590 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 RNF130Q86XS8 419 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 GOT1L1Q8NHS2 421 aaPredicted RBP17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 NFKBIDQ8NI38 313 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 KLK6Q92876 244 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 RHNO1Q9BSD3 238 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 CCDC90BQ9GZT6 254 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 MYNNQ9NPC7 610 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 ATAD3AQ9NVI7 634 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 ADPRHL2Q9NX46 363 aa17.88■□□□□ 0.45
PDLIM4-201ENST00000253754 A0A1W2PPC1 479 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 MAN1A2O60476 641 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 GPR37L1O60883 481 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TPP2P29144 1249 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 CTHP32929 405 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 RYKP34925 604 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 SOAT1P35610 550 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 PIK3CBP42338 1070 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 KIR2DL1P43626 348 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 OR1E2P47887 323 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 GTF2IRD2BQ6EKJ0 949 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 LCTLQ6UWM7 567 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 B3GNT8Q7Z7M8 397 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 GTF2IRD2Q86UP8 949 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 ANKRD53Q8N9V6 530 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 SPPL2AQ8TCT8 520 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 GAS2L1Q99501 681 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 SPATA9Q9BWV2 254 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TMEM184CQ9NVA4 438 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 MAPRE3Q9UPY8 281 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 PLPP1O14494 284 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 RRM2P31350 389 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TNFRSF4P43489 277 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 PLA2G16P53816 162 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 NUP107P57740 925 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 FBLIM1Q8WUP2 373 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 UBE2FQ969M7 185 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 CDX2Q99626 313 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 DOHHQ9BU89 302 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 SLC6A16Q9GZN6 736 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 ABCG4Q9H172 646 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TRIT1Q9H3H1 467 aaKnown RBP17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 KRT84Q9NSB2 600 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TAAR2Q9P1P5 351 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 TESMINQ9Y4I5 508 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 GMEB1Q9Y692 573 aa17.87■□□□□ 0.45
PDLIM4-201ENST00000253754 DNAH14Q0VDD8 3507 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 CKAP5Q14008 2032 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 TMEM265A0A087WTH1 108 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 PRR23AA6NEV1 266 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 AXIN1O15169 862 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 ANGPTL1O95841 491 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 NR4A1P22736 598 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 RPS6KA3P51812 740 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 EMP3P54852 163 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 GABARAPL2P60520 117 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 ENPP2Q13822 863 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 SMN1Q16637 294 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 GCNT6Q5T4J0 391 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 PIWIL3Q7Z3Z3 882 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 SLC9B2Q86UD5 537 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 ADGRF3Q8IZF5 1079 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 TTC29Q8NA56 475 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 OR52N2Q8NGI0 321 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 OR5K2Q8NHB8 316 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 SETD7Q8WTS6 366 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 TAMM41Q96BW9 452 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 F2RL3Q96RI0 385 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms