RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TAS2R50P59544 299 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 TUBA1BP68363 451 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 BAK1Q16611 211 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 C5orf22Q49AR2 442 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 AGAP6Q5VW22 663 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 TUBA1AQ71U36 451 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 TRAPPC5Q8IUR0 188 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ASCC1Q8N9N2 400 aaKnown RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 PPCDCQ96CD2 204 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 AGAP4Q96P64 663 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 NTMT1Q9BV86 223 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 TBC1D17Q9HA65 648 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 B4GALT6Q9UBX8 382 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ITGB1BP2Q9UKP3 347 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 GPR52Q9Y2T5 361 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 PLOD3O60568 738 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 F11P03951 625 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 GGT2P36268 569 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 CDK6Q00534 326 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 TARDBPQ13148 414 aaKnown RBP eCLIP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 NOGQ13253 232 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 GCNT6Q5T4J0 391 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF544Q6NX49 715 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 PNCKQ6P2M8 343 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 AGTRAPQ6RW13 159 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ABI3BPQ7Z7G0 1075 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 RBM45Q8IUH3 476 aaKnown RBP11.49□□□□□ -0.57
USHBP1-201ENST00000252597 CHST14Q8NCH0 376 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF740Q8NDX6 193 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 HUS1BQ8NHY5 278 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 XAGE5Q8WWM1 108 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 USP7Q93009 1102 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 NRTNQ99748 197 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
USHBP1-201ENST00000252597 PRAMEF33A0A0G2JMD5 474 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 TRIM64BA6NI03 449 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 PRAMEF10O60809 474 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 GPX5O75715 221 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 GASTP01350 101 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 JUNDP17535 347 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ETV3P41162 512 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ITGA1P56199 1179 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CAP1Q01518 475 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 KCNC4Q03721 635 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ERICH5Q6P6B1 374 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CALHM3Q86XJ0 350 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 IL17FQ96PD4 163 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 PRR14Q9BWN1 585 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SMURF1Q9HCE7 757 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ZDHHC4Q9NPG8 344 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ZSWIM8A7E2V4 1837 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CACNA1CQ13936 2221 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CLDN24A6NM45 220 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CA12O43570 354 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 TSPAN6O43657 245 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 GABRR2P28476 465 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SLC16A1P53985 500 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 KCNJ10P78508 379 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF45Q02386 682 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CNTN1Q12860 1018 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ALG1LQ6GMV1 187 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 DPY19L3Q6ZPD9 716 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 USP45Q70EL2 814 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 KAT2AQ92830 837 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
USHBP1-201ENST00000252597 UCKL1Q9NWZ5 548 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ZDHHC3Q9NYG2 299 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 ZNF226Q9NYT6 803 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 MYO15AQ9UKN7 3530 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
USHBP1-201ENST00000252597 DNAJB5O75953 348 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CD22P20273 847 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 PDHA2P29803 388 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 RAB8AP61006 207 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 MGAT3Q09327 533 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 FXNQ16595 210 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SLC5A12Q1EHB4 618 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 DNAJB7Q7Z6W7 309 aaPredicted RBP11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SERPINA11Q86U17 422 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CFAP206Q8IYR0 622 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CYB5D2Q8WUJ1 264 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 C17orf50Q8WW18 174 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
USHBP1-201ENST00000252597 HRASLS5Q96KN8 279 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 TM9SF2Q99805 663 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 SLC29A3Q9BZD2 475 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 RUVBL1Q9Y265 456 aaKnown RBP11.48□□□□□ -0.57
USHBP1-201ENST00000252597 CFL2Q9Y281 166 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 AP3M1Q9Y2T2 418 aa11.48□□□□□ -0.57
USHBP1-201ENST00000252597 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
USHBP1-201ENST00000252597 GLOD5A6NK44 160 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms