RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SEMA7AO75326 666 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 C9P02748 559 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ANXA4P09525 319 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 EEF1A2Q05639 463 aaKnown RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ZNF362Q5T0B9 420 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 SLCO4C1Q6ZQN7 724 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 PRSS48Q7RTY5 328 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ANKRD33Q7Z3H0 272 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 NPAS3Q8IXF0 933 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 NLGN4XQ8N0W4 816 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 SLC5A8Q8N695 610 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 VN1R2Q8NFZ6 395 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 SPPL2AQ8TCT8 520 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TTYH2Q9BSA4 534 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ZBP1Q9H171 429 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 FKBP14Q9NWM8 211 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TEKT2Q9UIF3 430 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 HSPE1-MOB4S4R3N1 261 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 SLC22A1O15245 554 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 RGS10O43665 173 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 PRMT3O60678 531 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TBX6O95947 436 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 RAB25P57735 213 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TLE2Q04725 743 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 PCDH1Q08174 1060 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ACSM2AQ08AH3 577 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ARMC4Q5T2S8 1044 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ACSM2BQ68CK6 577 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 WDR53Q7Z5U6 358 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 KLHDC8AQ8IYD2 350 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ZNF740Q8NDX6 193 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 SETD9Q8NE22 299 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 WDR48Q8TAF3 677 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ZNF480Q8WV37 535 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 LGALS12Q96DT0 336 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 DEFB118Q96PH6 123 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 EPYCQ99645 322 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 COQ7Q99807 217 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 QPCTLQ9NXS2 382 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ZNF226Q9NYT6 803 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 RPS6KA6Q9UK32 745 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 RUVBL1Q9Y265 456 aaKnown RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 ANTXRLA6NF34 631 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 FAM227AF5H4B4 570 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 CCL16O15467 120 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 LILRB5O75023 590 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 CSF2P04141 144 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 DCDC1P59894 354 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 NOGQ13253 232 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 MED22Q15528 200 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 HIST2H2ACQ16777 129 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 TRIM48Q8IWZ4 208 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 LRRC56Q8IYG6 542 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 OR9Q2Q8NGE9 314 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 OR5AK3PQ8NH89 298 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ASZ1Q8WWH4 475 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 STARD8Q92502 1023 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TP63Q9H3D4 680 aaPredicted RBP9.7□□□□□ -0.86
COPB1-201ENST00000249923 REEP1Q9H902 201 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ABCB9Q9NP78 766 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 ERVK13-1Q9NX77 482 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 BTNL2Q9UIR0 455 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 PCDHGA2Q9Y5H1 932 aa9.7□□□□□ -0.86
COPB1-201ENST00000249923 TRAV19A0A0A6YYK7 116 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 NOTOA8MTQ0 251 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 DSCR3O14972 297 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 GRM6O15303 877 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 DPM1O60762 260 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 C8AP07357 584 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TYRP14679 529 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 NPPBP16860 134 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PCGF2P35227 344 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 CPTPQ5TA50 214 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 VN1R5Q7Z5H4 357 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 LSRQ86X29 649 aaPredicted RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 CAPNS2Q96L46 248 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 COPS4Q9BT78 406 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 DOHHQ9BU89 302 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 SORBS1Q9BX66 1292 aaKnown RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PAK6Q9NQU5 681 aaPredicted RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 GPR83Q9NYM4 423 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 SPG21Q9NZD8 308 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TBC1D14Q9P2M4 693 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 COL4A3Q01955 1670 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 EFCAB9A8MZ26 197 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 C6orf47O95873 294 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 VIPR1P32241 457 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 LIMS1P48059 325 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PXNP49023 591 aaPredicted RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 PRLHRP49683 370 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TBPL1P62380 186 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 SELENOWP63302 87 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.861e-7■□□□□ 11.1
COPB1-201ENST00000249923 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 ATAD3BQ5T9A4 648 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms