RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DNAJB7Q7Z6W7 309 aaPredicted RBP16.19■□□□□ 0.18
SGPP1-201ENST00000247225 COQ8BQ96D53 544 aa16.19■□□□□ 0.18
SGPP1-201ENST00000247225 YIPF4Q9BSR8 244 aa16.19■□□□□ 0.18
SGPP1-201ENST00000247225 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
SGPP1-201ENST00000247225 RPRD1BQ9NQG5 326 aaKnown RBP16.19■□□□□ 0.18
SGPP1-201ENST00000247225 MIEF1Q9NQG6 463 aa16.19■□□□□ 0.18
SGPP1-201ENST00000247225 ITGB1BP2Q9UKP3 347 aa16.19■□□□□ 0.18
SGPP1-201ENST00000247225 MYO16Q9Y6X6 1858 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 H7C0S8 307 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 TLX2O43763 284 aaPredicted RBP16.18■□□□□ 0.18
SGPP1-201ENST00000247225 GPX2P18283 190 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 HNRNPFP52597 415 aaKnown RBP16.18■□□□□ 0.18
SGPP1-201ENST00000247225 CDK6Q00534 326 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 ZNF45Q02386 682 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 LMAN2Q12907 356 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 VEPH1Q14D04 833 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 DUSP7Q16829 419 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 DPY19L3Q6ZPD9 716 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 MTERF3Q96E29 417 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 SGIP1Q9BQI5 828 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 CNTRLQ7Z7A1 2325 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 CDH23Q9H251 3354 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 OR6C70A6NIJ9 312 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 HOXC8P31273 242 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 MRPL19P49406 292 aaKnown RBP16.18■□□□□ 0.18
SGPP1-201ENST00000247225 SELENOWP63302 87 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 HSPB3Q12988 150 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 SLC5A12Q1EHB4 618 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 GCNT6Q5T4J0 391 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 WDR53Q7Z5U6 358 aaPredicted RBP16.18■□□□□ 0.18
SGPP1-201ENST00000247225 IL17RDQ8NFM7 739 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 WDR48Q8TAF3 677 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 MAN2B2Q9Y2E5 1009 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 CFAP20Q9Y6A4 193 aaKnown RBP16.18■□□□□ 0.18
SGPP1-201ENST00000247225 MYOFQ9NZM1 2061 aa16.18■□□□□ 0.18
SGPP1-201ENST00000247225 ISPDA4D126 451 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TSPAN6O43657 245 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 AOC2O75106 756 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TUFMP49411 452 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PTSQ03393 145 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 HNRNPA0Q13151 305 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 RNASE12Q5GAN4 147 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 NLRP8Q86W28 1048 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PRR14Q9BWN1 585 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 SMURF1Q9HCE7 757 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 RUVBL1Q9Y265 456 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 GLTPD2A6NH11 291 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PLD2O14939 933 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 INPP1P49441 399 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PFN3P60673 137 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 LSM11P83369 360 aaKnown RBP eCLIP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 MTA1Q13330 715 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 USP30Q70CQ3 517 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 GHDCQ8N2G8 530 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 SYT14Q8NB59 555 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TESCQ96BS2 214 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PPCDCQ96CD2 204 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 IL17FQ96PD4 163 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 WRAP53Q9BUR4 548 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TRPC4Q9UBN4 977 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TMCC3Q9ULS5 477 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 GPR52Q9Y2T5 361 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TRBV4-1A0A0J9YWV2 114 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 GSAPA4D1B5 854 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 ARHGEF33A8MVX0 844 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 SEPT4O43236 478 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 EOMESO95936 686 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 PTTG1O95997 202 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 BCHEP06276 602 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 ATP1B2P14415 290 aaPredicted RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 AP1S1P61966 158 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 HOXC5Q00444 222 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 TBCEQ15813 527 aaPredicted RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 ZNF544Q6NX49 715 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 CASP12Q6UXS9 341 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 B3GLCTQ6Y288 498 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 MACC1Q6ZN28 852 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 USP45Q70EL2 814 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 ASCC1Q8N9N2 400 aaKnown RBP16.17■□□□□ 0.18
SGPP1-201ENST00000247225 ASB11Q8WXH4 323 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 FCGR1BQ92637 280 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 IL20RAQ9UHF4 553 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 VCANP13611 3396 aa16.17■□□□□ 0.18
SGPP1-201ENST00000247225 CCDC182A6NF36 153 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ZNF197O14709 1029 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 FZD6O60353 706 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CH25HO95992 272 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 JUPP14923 745 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CHMP24386 653 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ACVR2AP27037 513 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 GABRR2P28476 465 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TARDBPQ13148 414 aaKnown RBP eCLIP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 FADDQ13158 208 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 MICAQ29983 383 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 FAHD1Q6P587 224 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TRMT11Q7Z4G4 463 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 OR7G3Q8NG95 312 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TRMT61AQ96FX7 289 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms