RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 LGALS12Q96DT0 336 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 COPS4Q9BT78 406 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 EPS8L2Q9H6S3 715 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 THSD1Q9NS62 852 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 PSORS1C1Q9UIG5 152 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 KDM1AO60341 852 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 SOD1P00441 154 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 RHOP08100 348 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 ANXA8P13928 327 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 TNFRSF1BP20333 461 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 EEF1A2Q05639 463 aaKnown RBP20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 MPEG1Q2M385 716 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 FAM71E1Q6IPT2 247 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 CFAP206Q8IYR0 622 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 NFKBIDQ8NI38 313 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 WDR48Q8TAF3 677 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 SLC38A4Q969I6 547 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 PPCDCQ96CD2 204 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 OTUB2Q96DC9 234 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 WRAP53Q9BUR4 548 aaKnown RBP20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 ITPAQ9BY32 194 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 C1GALT1Q9NS00 363 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 POFUT2Q9Y2G5 429 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 PCDHGA2Q9Y5H1 932 aa20.74■□□□□ 0.91
SH2D3A-201ENST00000245908 KLHL18O94889 574 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 GBAP04062 536 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 BMP4P12644 408 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 ITGB8P26012 769 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 IRS1P35568 1242 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 CASP9P55211 416 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 MC1RQ01726 317 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 ELP6Q0PNE2 266 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TBCEQ15813 527 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 CLPPQ16740 277 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 HIST2H2ACQ16777 129 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TMEM236Q5W0B7 351 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 HIST2H2AA3Q6FI13 130 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 LRRC56Q8IYG6 542 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 OXR1Q8N573 874 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 ZNF366Q8N895 744 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 OR9A1PQ8NGU1 263 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 RPL3LQ92901 407 aaKnown RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 CIDECQ96AQ7 238 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TRPV5Q9NQA5 729 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 FKBP14Q9NWM8 211 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 LRRK1Q38SD2 2015 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 PRAMEF25A6NGN4 478 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 A8MVJ9 347 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TGFB1P01137 390 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 SPIBQ01892 262 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 C2orf80Q0P641 193 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TSTA3Q13630 321 aaPredicted RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 STARD3Q14849 445 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 METTL4Q8N3J2 472 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 RHOXF1Q8NHV9 184 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 TCF25Q9BQ70 676 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 SLIRPQ9GZT3 109 aaKnown RBP20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 OR51B5Q9H339 312 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 OSGIN1Q9UJX0 560 aa20.73■□□□□ 0.91
SH2D3A-201ENST00000245908 NOTCH4Q99466 2003 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 SPINT1O43278 529 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 WEE1P30291 646 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 TEKQ02763 1124 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 INAQ16352 499 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 MICAQ29983 383 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 AGAP7PQ5VUJ5 663 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 TRIM40Q6P9F5 258 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 NXPE4Q6UWF7 544 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 DNAJC22Q8N4W6 341 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 SLC5A11Q8WWX8 675 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 MYDGFQ969H8 173 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 MTERF3Q96E29 417 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 ZCCHC2Q9C0B9 1178 aaKnown RBP20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 ITM2CQ9NQX7 267 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 RLIMQ9NVW2 624 aa20.72■□□□□ 0.91
SH2D3A-201ENST00000245908 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 SAP18O00422 153 aaKnown RBP20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 ITGA2P17301 1181 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 OR1E2P47887 323 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 GSSP48637 474 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 PRIM2P49643 509 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 CDH12P55289 794 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 ERVFC1P60507 584 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 TAP2Q03519 686 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 EXOC3L2Q2M3D2 409 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 CRB2Q5IJ48 1285 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 LGI4Q8N135 537 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 LMNTD1Q8N9Z9 388 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 SPNS1Q9H2V7 528 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 ACSL6Q9UKU0 697 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 HCFC2Q9Y5Z7 792 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 IRAK3Q9Y616 596 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 EFCAB9A8MZ26 197 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 CDK6Q00534 326 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 ZNF630Q2M218 657 aaPredicted RBP20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 TRAPPC5Q8IUR0 188 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 CCDC103Q8IW40 242 aa20.71■□□□□ 0.91
SH2D3A-201ENST00000245908 CADM3Q8N126 398 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms