RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 HNF1BP35680 557 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 HSD17B2P37059 387 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 KCNC4Q03721 635 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 EMX1Q04741 257 aaPredicted RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 TAF13Q15543 124 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 DPY19L1Q2PZI1 675 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 RASSF6Q6ZTQ3 369 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 TMEM145Q8NBT3 493 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 SETD6Q8TBK2 473 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 FAM3CQ92520 227 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 SLC9A6Q92581 669 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 GFM1Q96RP9 751 aaKnown RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 ZNF607Q96SK3 696 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 A0A1W2PP18 115 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 SLC28A2O43868 658 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 DDOSTP39656 456 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 NFKB2Q00653 900 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 OC90Q02509 493 aaPredicted RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 MGAT3Q09327 533 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 MTAPQ13126 283 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 FAM174BQ3ZCQ3 159 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 TYW3Q6IPR3 259 aaKnown RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 MACC1Q6ZN28 852 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 XAGE5Q8WWM1 108 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 TFGQ92734 400 aaPredicted RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 EFCAB11Q9BUY7 163 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 ZNF576Q9H609 170 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 ERVK13-1Q9NX77 482 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 HCN3Q9P1Z3 774 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 COPS7AQ9UBW8 275 aa10.6□□□□□ -0.71
COPA-201ENST00000241704 NUFIP1Q9UHK0 495 aaKnown RBP10.6□□□□□ -0.71
COPA-201ENST00000241704 HMX2A2RU54 273 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 DRGXA6NNA5 263 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 JMJD7P0C870 316 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PFKLP17858 780 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 ADARB1P78563 741 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 SEMA3AQ14563 771 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 LRRC26Q2I0M4 334 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ZNF678Q5SXM1 525 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 MLIPQ5VWP3 458 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 TAS1R1Q7RTX1 841 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 SLC51BQ86UW2 128 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PARP16Q8N5Y8 322 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PSD4Q8NDX1 1056 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 HLA-CQ95604 372 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 SPRTNQ9H040 489 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 CFAP20Q9Y6A4 193 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 RPS3P23396 243 aaKnown RBP eCLIP10.59□□□□□ -0.715e-7■■■□□ 19.1
COPA-201ENST00000241704 DUSP3P51452 185 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 RFTN2Q52LD8 501 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 RUNDC3AQ59EK9 446 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 MRPL43Q8N983 215 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 DNAJB8Q8NHS0 232 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 RHEBL1Q8TAI7 183 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 SLC39A13Q96H72 371 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 TMEM74Q96NL1 305 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 MTERF1Q99551 399 aaKnown RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 MED28Q9H204 178 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 CD300AQ9UGN4 299 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 SLCO3A1Q9UIG8 710 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 FABP12A6NFH5 140 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PLOD3O60568 738 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 HMGCLP35914 325 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 AQP6Q13520 282 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 FXNQ16595 210 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ADPRMQ3LIE5 342 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ZNF805Q5CZA5 627 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 NCEH1Q6PIU2 408 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ARHGAP12Q8IWW6 846 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 FAM83FQ8NEG4 500 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 AP3S1Q92572 193 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 MAP6Q96JE9 813 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 SLC30A3Q99726 388 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 ATP13A2Q9NQ11 1180 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 GDE1Q9NZC3 331 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 PDP1Q9P0J1 537 aaPredicted RBP10.59□□□□□ -0.71
COPA-201ENST00000241704 SSR3Q9UNL2 185 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 HCFC2Q9Y5Z7 792 aa10.59□□□□□ -0.71
COPA-201ENST00000241704 AP2A2O94973 939 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 PGRP06401 933 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 CPN2P22792 545 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 HTR1EP28566 365 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 ARSDP51689 593 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 CLCN4P51793 760 aa10.58□□□□□ -0.72
COPA-201ENST00000241704 SNRPD2P62316 118 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms