RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 IKZF2Q9UKS7 526 aa13.24□□□□□ -0.29
NFKB1-201ENST00000226574 ORC5O43913 435 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ACRV1P26436 265 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TLX1P31314 330 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CLCNKAP51800 687 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 LMAN2Q12907 356 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CEP68Q76N32 757 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 METTL3Q86U44 580 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 MMAAQ8IVH4 418 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 DCAF4L2Q8NA75 395 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 DNAJB8Q8NHS0 232 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 DNAJA3Q96EY1 480 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 C12orf66Q96MD2 445 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 XKR8Q9H6D3 395 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 NUFIP1Q9UHK0 495 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 A0A075B6Q4 140 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 FXYD1O00168 92 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ERI3O43414 337 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 MPZL2O60487 215 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 IL3P08700 152 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 BMP4P12644 408 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CTNNB1P35222 781 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CDKN2CP42773 168 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 MAGEA12P43365 314 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 AP2S1P53680 142 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ARPC4P59998 168 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 BIKQ13323 160 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TRIM71Q2Q1W2 868 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 LEXMQ3ZCV2 418 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ALKAL1Q6UXT8 129 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 COMMD2Q86X83 199 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TMEM145Q8NBT3 493 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 GATAD2BQ8WXI9 593 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TRIB2Q92519 343 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CXorf40BQ96DE9 158 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 SIPA1Q96FS4 1042 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 RHNO1Q9BSD3 238 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 EIF3KQ9UBQ5 218 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ANKRD36CQ5JPF3 1778 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 I3L521 148 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ADAM12O43184 909 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 AP1G1O43747 822 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 HPRP00739 348 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 NT5EP21589 574 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 DCKP27707 260 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 CA5AP35218 305 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 IDUAP35475 653 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ID2Q02363 134 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 LY6G5CQ5SRR4 150 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 ZNF613Q6PF04 617 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 PSRC1Q6PGN9 363 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 GOLM1Q8NBJ4 401 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 OR13F1Q8NGS4 319 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 OR8D1Q8WZ84 308 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TP63Q9H3D4 680 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-201ENST00000226574 NECTIN3Q9NQS3 549 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 NLKQ9UBE8 527 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 SPEF1Q9Y4P9 236 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
NFKB1-201ENST00000226574 TRIP11Q15643 1979 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 DOCK2Q92608 1830 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 DAPL1A0PJW8 107 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 INHBEP58166 350 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 ZNF763Q0D2J5 394 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 RPS26P11Q5JNZ5 115 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PRAMEF14Q5SWL7 426 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PRAMEF13Q5VWM6 474 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 Q6ZNX1 250 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 B3GNT8Q7Z7M8 397 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 OXR1Q8N573 874 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 OR6K6Q8NGW6 343 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 LKAAEAR1Q8TD35 194 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 SNX33Q8WV41 574 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CDK5RAP2Q96SN8 1893 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 NPIPB15A6NHN6 443 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 YES1P07947 543 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 HK3P52790 923 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CTSL3PQ5NE16 218 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 C22orf39Q6P5X5 142 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms