RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PHOSPHO2Q8TCD6 241 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 TP53I11O14683 189 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 EDNRAP25101 427 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 GMPRP36959 345 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 SYT16Q17RD7 645 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 LACTB2Q53H82 288 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-201ENST00000223398 SLC35F1Q5T1Q4 408 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 DNM1P34Q6PK57 102 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 PNPLA1Q8N8W4 532 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 TMBIM1Q969X1 311 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 PRR11Q96HE9 360 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-201ENST00000223398 OSBPL7Q9BZF2 842 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 MS4A12Q9NXJ0 267 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 GRHPRQ9UBQ7 328 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 OAZ3Q9UMX2 235 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 PTGDR2Q9Y5Y4 395 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 ADAM12O43184 909 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 RCBTB2O95199 551 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 EDN1P05305 212 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 SLC6A11P48066 632 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 SLC18A2Q05940 514 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 OR2L3Q8NG85 312 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 AURKBQ96GD4 344 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-201ENST00000223398 ZFP3Q96NJ6 502 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 SNTG1Q9NSN8 517 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 FAM240BA0A1B0GVZ2 78 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 NUDT6P53370 316 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 HERC3Q15034 1050 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 C18orf21Q32NC0 220 aaPredicted RBP17.77■□□□□ 0.44
CLIP2-201ENST00000223398 OR2T5Q6IEZ7 315 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF627Q7L945 461 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 PIGWQ7Z7B1 504 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 OR2T29Q8NH02 315 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 MYLIPQ8WY64 445 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 HTRA1Q92743 480 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 HLA-CQ95604 372 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 RETREG1Q9H6L5 497 aa17.77■□□□□ 0.44
CLIP2-201ENST00000223398 ACSL1P33121 698 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 NDUFA5Q16718 116 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 TMEM225Q6GV28 225 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 TMEM107Q6UX40 140 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 PNPLA2Q96AD5 504 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 TRPV5Q9NQA5 729 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 PRODH2Q9UF12 536 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 PCDHGB5Q9Y5G0 923 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 NPC1O15118 1278 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 CREG1O75629 220 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 SYNGR4O95473 234 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 DOC2AQ14183 400 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 RNF111Q6ZNA4 994 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 Q6ZSR6 202 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 OR8K5Q8NH50 307 aa17.77■□□□□ 0.43
CLIP2-201ENST00000223398 TOE1Q96GM8 510 aaKnown RBP17.77■□□□□ 0.43
CLIP2-201ENST00000223398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.77■□□□□ 0.43
CLIP2-201ENST00000223398 KAT6AQ92794 2004 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 A0A1W2PP18 115 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 HMGCLP35914 325 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CXCL12P48061 93 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CAPZA1P52907 286 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF630Q2M218 657 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CD180Q99467 661 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 SMURF2Q9HAU4 748 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 ZBTB20Q9HC78 741 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-201ENST00000223398 FKBP7Q9Y680 259 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 ADNP2Q6IQ32 1131 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLIP2-201ENST00000223398 MCHR1Q99705 422 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CMKLR1Q99788 373 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 PADI2Q9Y2J8 665 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 A0A1W2PPL8 197 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 TIFABQ6ZNK6 161 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 NUP43Q8NFH3 380 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 TMEM203Q969S6 136 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CRELD1Q96HD1 420 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 EFCAB9A8MZ26 197 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 RNH1P13489 461 aaKnown RBP17.76■□□□□ 0.43
CLIP2-201ENST00000223398 MLLT10P55197 1068 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 EMC10Q5UCC4 262 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 KIAA0319Q5VV43 1072 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 CAPSLQ8WWF8 208 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 ALPK1Q96QP1 1244 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 OR1F2PQ96R84 312 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF717Q9BY31 904 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-201ENST00000223398 TNFRSF10DQ9UBN6 386 aa17.76■□□□□ 0.43
CLIP2-201ENST00000223398 SLC16A5O15375 505 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 TACSTD2P09758 323 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 DAG1Q14118 895 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 IER5LQ5T953 404 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 CROCCP3Q8IVE0 287 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF382Q96SR6 550 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 TM9SF2Q99805 663 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 TSSK6Q9BXA6 273 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 MARK1Q9P0L2 795 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 SLC7A8Q9UHI5 535 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 VILLO15195 856 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 PRKACGP22612 351 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 SLC6A4P31645 630 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 C6orf136Q5SQH8 315 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms