RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 GEMIN6Q8WXD5 167 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CLIP3Q96DZ5 547 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ZBED6CLQ96FA7 236 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ANK1P16157 1881 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SNPHO15079 494 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ACOX3O15254 700 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ZW10O43264 779 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SNX4O95219 450 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 AVPR1BP47901 424 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 RNF144AP50876 292 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 EMX1Q04741 257 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TUBA3CQ13748 450 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 UGT8Q16880 541 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 IQCCQ4KMZ1 466 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 RPS26P11Q5JNZ5 115 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ALG1LQ6GMV1 187 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ARMC6Q6NXE6 501 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 PARS2Q7L3T8 475 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TRIM46Q7Z4K8 759 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 LRRTM4Q86VH4 590 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TP53INP1Q96A56 240 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 Q96MT0 163 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TEFMQ96QE5 360 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 AMBRA1Q9C0C7 1298 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 POLR2J2Q9GZM3 115 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 IL1RAPQ9NPH3 570 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 FGF19O95750 216 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 IDSP22304 550 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 CCR8P51685 355 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 GSTM4Q03013 218 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SPCS2Q15005 226 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TSTQ16762 297 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TCEAL5Q5H9L2 206 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 MPP7Q5T2T1 576 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SHQ1Q6PI26 577 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 GALNT13Q8IUC8 556 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SLC35G5Q96KT7 338 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 C11orf49Q9H6J7 331 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 FAIMQ9NVQ4 179 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TCRBV5S2A0A599 114 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 IGLON5A6NGN9 336 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 FZD6O60353 706 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 CCT3P49368 545 aaKnown RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 BCAP31P51572 246 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SLC7A9P82251 487 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 NKG7Q16617 165 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 CPZQ66K79 652 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
RAB3D-201ENST00000222120 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ITPAQ9BY32 194 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 WDR26Q9H7D7 661 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 KCNK12Q9HB15 430 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 TBCCD1Q9NVR7 557 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF780BQ9Y6R6 833 aa13.04□□□□□ -0.32
RAB3D-201ENST00000222120 AP3D1O14617 1153 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 KLK8O60259 260 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 PSMA1P25786 263 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 HBA1P69905 142 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 PSD4Q8NDX1 1056 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 RNF6Q9Y252 685 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 SLC16A5O15375 505 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 TLX2O43763 284 aaPredicted RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 GUCY1B2O75343 617 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 DNTTP04053 509 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 NR2F6P10588 404 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 ACPPP15309 386 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 CRB2Q5IJ48 1285 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 OOSP2Q86WS3 158 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 MEX3DQ86XN8 651 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 CCDC116Q8IYX3 515 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 NLGN4XQ8N0W4 816 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 TEX47Q8TBZ9 253 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 BARD1Q99728 777 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 HS3ST2Q9Y278 367 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 POFUT2Q9Y2G5 429 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 CAB39Q9Y376 341 aaPredicted RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
RAB3D-201ENST00000222120 LCTP09848 1927 aa13.03□□□□□ -0.32
RAB3D-201ENST00000222120 HNRNPCL2B2RXH8 293 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms