RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 CYP17A1P05093 508 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C7P10643 843 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 P4HA3Q7Z4N8 544 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 ZSWIM9Q86XI8 627 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 GID4Q8IVV7 300 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SLC44A3Q8N4M1 653 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 ENDOVQ8N8Q3 282 aaKnown RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 FBXL20Q96IG2 436 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 GNG8Q9UK08 70 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 TEX13CA0A0J9YWL9 993 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SDHDO14521 159 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 KDM4BO94953 1096 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ITGA5P08648 1049 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 C1GALT1C1LP0DN25 315 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 VAMP1P23763 118 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 GRK5P34947 590 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 PTPRCAPQ14761 206 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 OCLNQ16625 522 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ITPRIPL2Q3MIP1 535 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SFT2D3Q587I9 215 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 OR10Q1Q8NGQ4 319 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 GLYATL1Q969I3 302 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 BARD1Q99728 777 aaKnown RBP13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SLC2A11Q9BYW1 496 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 OR51I1Q9H343 314 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 GIMAP2Q9UG22 337 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 CD1DP15813 335 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 PLGLB1Q02325 96 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ATP6AP1Q15904 470 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 UPP1Q16831 310 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ALG10Q5BKT4 473 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 PHF19Q5T6S3 580 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ERN2Q76MJ5 926 aaKnown RBP13.08□□□□□ -0.32
SF3A1-201ENST00000215793 TRAM1L1Q8N609 369 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 NUDT15Q9NV35 164 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 DNAJC27Q9NZQ0 273 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 LIPT1Q9Y234 373 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 MUSKO15146 869 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 VILLO15195 856 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 FLRT2O43155 660 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 COCHO43405 550 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SOX30O94993 753 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 HTR1EP28566 365 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 MAGEA2P43356 314 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 AGTR2P50052 363 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 HYAL2Q12891 473 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 NRROSQ86YC3 692 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 KLHDC7BQ96G42 594 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 RANBP9Q96S59 729 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 CMKLR1Q99788 373 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 MMP27Q9H306 513 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SCP2D1Q9UJQ7 156 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 OARD1Q9Y530 152 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 MYOM1P52179 1685 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 KLHL33A6NCF5 533 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 H7BY64 318 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 STATHP02808 62 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
SF3A1-201ENST00000215793 POU6F2P78424 691 aaPredicted RBP13.08□□□□□ -0.32
SF3A1-201ENST00000215793 VMACQ2NL98 169 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ZFAND4Q86XD8 727 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 PRAP1Q96NZ9 151 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 TTYH2Q9BSA4 534 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 RMI1Q9H9A7 625 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
SF3A1-201ENST00000215793 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 STOMP27105 288 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 GINS1Q14691 196 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 PLEKHG7Q6ZR37 379 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 PSD4Q8NDX1 1056 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 RAB8BQ92930 207 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 GAL3ST3Q96A11 431 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 LAMP5Q9UJQ1 280 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CCRL2O00421 344 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF623O75123 536 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 GSRP00390 522 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 GLDCP23378 1020 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 GLP1RP43220 463 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF41P51814 821 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 PHC1P78364 1004 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 FAM182AQ5T1J6 154 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CCSAPQ6IQ19 270 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SLC27A4Q6P1M0 643 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms