RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MED11Q9P086 117 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MGAT4AQ9UM21 535 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 GPR52Q9Y2T5 361 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 A0A1W2PP18 115 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 NOTOA8MTQ0 251 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ITGA10O75578 1167 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC29A4Q7RTT9 530 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 PCBD2Q9H0N5 130 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ENAMQ9NRM1 1142 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 LAMP5Q9UJQ1 280 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MYH10P35580 1976 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SCO2O43819 266 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 CYB5AP00167 134 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ALDOAP04075 364 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 GPR4P46093 362 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 PSMA6P60900 246 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 PSAPL1Q6NUJ1 521 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 TMIGD1Q6UXZ0 262 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 OR51A7Q8NH64 312 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 FBXO27Q8NI29 283 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC6A7Q99884 636 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 NDC1Q9BTX1 674 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SMURF1Q9HCE7 757 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 CITO14578 2027 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 RAD1O60671 282 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 RAB36O95755 333 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 HAPLN1P10915 354 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 BMP8BP34820 402 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 STC1P52823 247 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 NRG3P56975 720 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 LRIT3Q3SXY7 679 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 LRRC70Q7Z2Q7 622 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 BMP8AQ7Z5Y6 402 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 OR6Q1Q8NGQ2 317 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ZIM2Q9NZV7 527 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 MYO10Q9HD67 2058 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ATF6P18850 670 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ARPC4P59998 168 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 METTL7AQ9H8H3 244 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 FAM171A2A8MVW0 826 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 TBRG1Q3YBR2 411 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 CD300LFQ8TDQ1 290 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 TSACCQ96A04 125 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 DERL2Q9GZP9 239 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ZFR2Q9UPR6 939 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 HEBP2Q9Y5Z4 205 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 KMOO15229 486 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 IL3P08700 152 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SRCP12931 536 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 GABRA3P34903 492 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ZMYND11Q15326 602 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 GRK1Q15835 563 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 SIAH1Q8IUQ4 282 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 MRGPRX2Q96LB1 330 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF285Q96NJ3 590 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ORAI3Q9BRQ5 295 aa13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-201ENST00000212355 ILVBLA1L0T0 632 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 MITFO75030 526 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 BPNT1O95861 308 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 GNAO1P09471 354 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PTX3P26022 381 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 EFR3AQ14156 821 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 CRTC1Q6UUV9 634 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 SAMD12Q8N8I0 201 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 NTAN1Q96AB6 310 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 USP29Q9HBJ7 922 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 PROM1O43490 865 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 APOC1P02654 83 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 ST3GAL4Q11206 333 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 FIGNL1Q6PIW4 674 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
TGFBR3-201ENST00000212355 LDAHQ9H6V9 325 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms