RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ARFRP1Q13795 201 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 FAM124AQ86V42 546 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ZNF227Q86WZ6 799 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 BOLLQ8N9W6 283 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 OR6K2Q8NGY2 324 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 NFKBIDQ8NI38 313 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 BRINP2Q9C0B6 783 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 OCEL1Q9H607 264 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 GPR83Q9NYM4 423 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 RHCGQ9UBD6 479 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CA5BQ9Y2D0 317 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 HSPE1-MOB4S4R3N1 261 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ARVCFO00192 962 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CCL16O15467 120 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 B4GAT1O43505 415 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 USP2O75604 605 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 ALDOBP05062 364 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CHRNA4P43681 627 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 AVPR1BP47901 424 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ALDH3B2P48448 385 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 LUMP51884 338 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 DIO3P55073 304 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CYBRD1Q53TN4 286 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SPRYD7Q5W111 196 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 C3P1Q6ZMU1 363 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 PARGQ86W56 976 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 OR2L8Q8NGY9 312 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 TESCQ96BS2 214 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 C3orf49Q96BT1 292 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 ABCG4Q9H172 646 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 OR51F1A6NGY5 319 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 GABRDO14764 452 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 GRID2O43424 1007 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 FMO6PO60774 539 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 TACSTD2P09758 323 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ELNP15502 786 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 RPL10P27635 214 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 FXYD6P3P58550 94 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 DSTNP60981 165 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 IL10RBQ08334 325 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 NPRL3Q12980 569 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 SF1Q15637 639 aaKnown RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 XKR4Q5GH76 650 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 C2orf73Q8N5S3 287 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 SGTBQ96EQ0 304 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 CALML5Q9NZT1 146 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
VCL-201ENST00000211998 DNMT3AQ9Y6K1 912 aaPredicted RBP10.1□□□□□ -0.79
VCL-201ENST00000211998 A0A1W2PRB8 838 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LCMT2O60294 686 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 RPP14O95059 124 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 PTPN2P17706 415 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 DRD5P21918 477 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 DNAJB1P25685 340 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 DCKP27707 260 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TRIM23P36406 574 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 NKX6-1P78426 367 aaPredicted RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 DYRK1AQ13627 763 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 PSRC1Q6PGN9 363 aaPredicted RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 SHQ1Q6PI26 577 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 OR5AK3PQ8NH89 298 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LURAP1Q96LR2 239 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 CAMK1GQ96NX5 476 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ARPC5LQ9BPX5 153 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LRRC72A6NJI9 287 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 MUSKO15146 869 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 INPPL1O15357 1258 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 INSIG1O15503 277 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 OR4Q2P0C623 313 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SPATA31D3P0C874 917 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GTF2F2P13984 249 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 MAGEA11P43364 429 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LEPRP48357 1165 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 ERVK-21P61565 698 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GPR19Q15760 415 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GXYLT1Q4G148 440 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SPATA31D4Q6ZUB0 917 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 PARP16Q8N5Y8 322 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 RHOXF1Q8NHV9 184 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SHKBP1Q8TBC3 707 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ARL11Q969Q4 196 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 MOCOSQ96EN8 888 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SIGLEC10Q96LC7 697 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 OR51I1Q9H343 314 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 WASH6PQ9NQA3 447 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TMEM98Q9Y2Y6 226 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 E9PI62 339 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SNNO75324 88 aaPredicted RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 CAPN15O75808 1086 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms