RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 C11orf91Q3C1V1 193 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 NXPE4Q6UWF7 544 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 PLEKHG7Q6ZR37 379 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CATSPERGQ6ZRH7 1159 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SLC9A9Q8IVB4 645 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 FOXRED2Q8IWF2 684 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 NLGN4XQ8N0W4 816 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 OR6K2Q8NGY2 324 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CD180Q99467 661 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 NKX2-4Q9H2Z4 354 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CPQQ9Y646 472 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 RNF212BA8MTL3 300 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 ADH4P08319 380 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 TYRP1P17643 537 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SREBF1P36956 1147 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CYP27C1Q4G0S4 372 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 PIGGQ5H8A4 983 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SFXN2Q96NB2 322 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 TMEM209Q96SK2 561 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 ZSCAN5AQ9BUG6 496 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 OBP2BQ9NPH6 170 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 USP42Q9H9J4 1324 aaKnown RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 A0A1W2PQJ5 194 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 OR2M5A3KFT3 312 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GSTM3P21266 225 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 LUMP51884 338 aaPredicted RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 AQP5P55064 265 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 RAB10P61026 200 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CRMP1Q14194 572 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 ZNF829Q3KNS6 432 aaPredicted RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 CARD17Q5XLA6 110 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 BBS12Q6ZW61 710 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 TMEM130Q8N3G9 435 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 HDAC7Q8WUI4 952 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 RHBDF1Q96CC6 855 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 OR14A2Q96R54 314 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 MAGEH1Q9H213 219 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CREBZFQ9NS37 354 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 DKK3Q9UBP4 350 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 C13orf42A0A1B0GVH6 325 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 H3BMQ9 156 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 SCAMP3O14828 347 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 LATO43561 262 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GSTP1P09211 210 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 GZMAP12544 262 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RAC1P63000 192 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ST3GAL3Q11203 375 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF718Q3SXZ3 478 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 FSTL4Q6MZW2 842 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 AHSA2Q719I0 299 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GRAMD2AQ8IUY3 354 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 OR4E2Q8NGC2 313 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF681Q96N22 645 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CPEB1Q9BZB8 566 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 CUEDC1Q9NWM3 386 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 P2RX2Q9UBL9 471 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 MEOX1P50221 254 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 KLF10Q13118 480 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF267Q14586 743 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 RALGPS2Q86X27 583 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 LSMEM2Q8N112 164 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 H1FXQ92522 213 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 ANKS1AQ92625 1134 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CCDC32Q9BV29 185 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF223Q9UK11 482 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 SALL1Q9NSC2 1324 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TTC24A2A3L6 582 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 TOR1BO14657 336 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 INSIG1O15503 277 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 PROSCO94903 275 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RPL17P18621 184 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 RPS23P62266 143 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 LIN52Q52LA3 116 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 N4BP2L1Q5TBK1 243 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 CCDC28AQ8IWP9 274 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TRIM43Q96BQ3 446 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 TMEM43Q9BTV4 400 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TWSG1Q9GZX9 223 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GCM1Q9NP62 436 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 PCYOX1Q9UHG3 505 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 BCORL1Q5H9F3 1711 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TULP2O00295 520 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ZNF185O15231 689 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 LCMT2O60294 686 aaKnown RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 CNIH1O95406 144 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TNFRSF4P43489 277 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 POU6F2P78424 691 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 TDGQ13569 410 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 QPCTQ16769 361 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 ASTE1Q2TB18 679 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 MSS51Q4VC12 460 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 CMTM1Q8IZ96 169 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 GRHL3Q8TE85 626 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 HDAC10Q969S8 669 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 RAB7BQ96AH8 199 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 HOPXQ9BPY8 73 aaPredicted RBP3.33□□□□□ -1.88
NEB-201ENST00000172853 ISCUQ9H1K1 167 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 TAS2R9Q9NYW1 312 aa3.33□□□□□ -1.88
NEB-201ENST00000172853 COPZ2Q9P299 210 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms