RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Olfr1508Q9R0K4 310 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 AtmQ62388 3066 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Wdr76A6PWY4 622 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Vmn2r76E9Q3F5 853 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gtf2h4O70422 463 aaKnown RBP21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Htr5bP31387 370 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 AbatP61922 500 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Wdr36Q3TAQ9 899 aaKnown RBP21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Pkp4Q68FH0 1190 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gramd1bQ80TI0 738 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Ccdc151Q8BSN3 593 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gpr22Q8BZL4 432 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Slc45a3Q8K0H7 553 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Ints14Q8R3P6 515 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Erlec1Q8VEH8 483 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Olfr1276Q8VF40 312 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 HnrnprQ8VHM5 632 aaKnown RBP21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Cnot11Q9CWN7 505 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Xylt2Q9EPL0 865 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Snap29Q9ERB0 260 aa21.7■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Fer1l4A3KGK3 1992 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Otud3B1AZ99 396 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Olfr564E9PWA8 316 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Sod1P08228 154 aaKnown RBP21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Glycam1Q02596 151 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gspt2Q149F3 632 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gngt2Q61017 69 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Dusp23Q6NT99 150 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Bnc2Q8BMQ3 1127 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Ugt2b34Q8K154 532 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Vmn1r22Q8R2D1 302 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 SharpinQ91WA6 380 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Nde1Q9CZA6 344 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gpn3Q9D3W4 284 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Lrrc34Q9DAM1 415 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 ItgaxQ9QXH4 1169 aa21.69■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Fam47eD3YWC7 402 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gm3020E9Q3J7 150 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gm5861F6VCN9 180 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 4933402N22RikF7D1B3 190 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Slc16a8O35308 492 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 JunbP09450 344 aaKnown RBP21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 P18533 117 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Hpcal1P62748 193 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Zc3h12aQ5D1E7 596 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Ddx5Q61656 614 aaKnown RBP21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Tmem121Q80XA0 318 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Slco4c1Q8BGD4 722 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 PstkQ8BP74 359 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Cops7bQ8BV13 264 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Ifi44Q8BV66 422 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Zhx3Q8C0Q2 951 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gm3411Q8C7R2 150 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Lgi4Q8K1S1 537 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 McatQ8R3F5 381 aaKnown RBP21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Rpusd1Q8VCZ8 306 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Aif1lQ9EQX4 150 aa21.68■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Olfr1153A2AVC0 318 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 JhyE9Q793 770 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gm8879F6R3J9 157 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gm43302L7N1X8 611 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Klk1b8P07628 261 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 AprtP08030 180 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gli1P47806 1111 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Stat6P52633 837 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Il12rb2P97378 874 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Gbp10Q000W5 611 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Coq10bQ3THF9 240 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Lrrn4clQ3TYX2 239 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Slc30a10Q3UVU3 470 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Armcx5Q3UZB0 606 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Cars2Q8BYM8 551 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Stbd1Q8C7E7 338 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Olfr351Q8VGK1 310 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Sh2d4aQ9D7V1 421 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Pfn3Q9DAD6 137 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Cyb5r1Q9DB73 305 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Olfr630Q9EQQ7 319 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 TrehQ9JLT2 576 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 SqorQ9R112 450 aa21.67■■□□□ 1.06
Scn1b-201ENSMUST00000098548 RbpjlO08674 515 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 CidebO70303 219 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Aqp1Q02013 269 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 ptchd1Q14B62 888 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 E330014E10RikQ3UL33 481 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 D5Ertd577eQ499F0 481 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Krtcap2Q5RL79 136 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Rbl1Q64701 1063 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Dennd5aQ6PAL8 1287 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Adamtsl2Q7TSK7 957 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Trim23Q8BGX0 574 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Smyd4Q8BTK5 799 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 C1qtnf7Q8BVD7 289 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Piwil4Q8CGT6 848 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Mrps18cQ8R2L5 143 aaKnown RBP21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 BniplQ99JU7 328 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 C1qtnf2Q9D8U4 294 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Fstl3Q9EQC7 256 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 Rad1Q9QWZ1 280 aa21.66■■□□□ 1.06
Scn1b-201ENSMUST00000098548 DguokQ9QX60 277 aa21.66■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms