RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 EllO08856 602 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Neu1O35657 409 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 CflarO35732 481 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sp3O70494 783 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 F2P19221 618 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Defa8P50706 81 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp935Q14DI0 353 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Alg6Q3TAE8 507 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tex10Q3URQ0 928 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Q5SPV6 233 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 WlsQ6DID7 541 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 D11Wsu47eQ6PIX9 558 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Eml2Q7TNG5 649 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr1037Q7TR84 321 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Samd4bQ80XS6 687 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ugt2b35Q8BJL9 529 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Eri3Q8C460 337 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 TbcelQ8C5W3 424 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zc3h3Q8CHP0 950 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 CcsapQ8QZT2 252 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 4930519G04RikQ9CPT7 205 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sugt1Q9CX34 336 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lamtor5Q9D1L9 91 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pop5Q9DB28 169 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 PrkraQ9WTX2 313 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Khdrbs2Q9WU01 349 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 CtszQ9WUU7 306 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ehd1Q9WVK4 534 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ybx2Q9Z2C8 360 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mrpl40Q9Z2Q5 206 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r90A0A087WR36 309 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cd163l1A0A1B0GSB0 991 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm5475D3YV11 175 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 3110082J24RikF6Z6Z2 108 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gtf2h4O70422 463 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 H2-T23P06339 357 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 MyogP12979 224 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hspa1bP17879 642 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Il1r2P27931 410 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Grik2P39087 908 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 ThpoP40226 356 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 ArsaP50428 506 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Stat6P52633 837 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 IgfalsP70389 603 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 ElocP83940 112 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cxcr5Q04683 374 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Col28a1Q2UY11 1141 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dtx3lQ3UIR3 748 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 OgnQ62000 298 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mc2rQ64326 296 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Szrd1Q6NXN1 152 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 GnptgQ6S5C2 307 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gpr75Q6X632 540 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Arl15Q8BGR6 204 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mief1Q8BGV8 463 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sertm1Q8CD78 107 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Scara5Q8K299 491 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cadm4Q8R464 388 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 HpgdQ8VCC1 269 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Chchd4Q8VEA4 139 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r69Q8VIC1 319 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Man2c1Q91W89 1039 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cela1Q91X79 266 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Asb9Q91ZT8 290 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rnf111Q99ML9 989 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 PigkQ9CXY9 395 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Serpinb1aQ9D154 379 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Uqcrc2Q9DB77 453 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Golga4Q91VW5 2238 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp964B2RR88 472 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Clip3B9EHT4 547 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 AU018091E9PWS4 684 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r238E9Q373 306 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Speer4eK7N6S8 255 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 AladP10518 330 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Htr3aP23979 487 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Impdh2P24547 514 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dsc2P55292 902 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pfkfb2P70265 519 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Kcnj13P86046 360 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Wbp1P97764 304 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Glycam1Q02596 151 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gspt2Q149F3 632 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pitpnm3Q3UHE1 974 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyb5d2Q5SSH8 263 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Elavl4Q61701 385 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pon2Q62086 354 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rps9Q6ZWN5 194 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Trim23Q8BGX0 574 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pcdh20Q8BIZ0 952 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gbp9Q8BTS3 619 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ikzf5Q8BU00 419 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pomgnt2Q8BW41 605 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Snx16Q8C080 344 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Bbs4Q8C1Z7 520 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Yipf4Q8C407 246 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem198bQ8CFU0 350 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 N4bp2l2Q8JZS6 575 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r219Q8R271 312 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr693Q8VF89 316 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms