RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ankrd34aB2RW11 495 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Kctd17E0CYQ0 296 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr620E9PZ66 313 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ifi203O35368 408 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gal3st3P61315 431 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Smpd1Q04519 627 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Hectd3Q3U487 861 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Diras2Q5PR73 199 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ggt1Q60928 568 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Bpifb1Q61114 474 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Atat1Q8K341 421 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 RergQ8R367 199 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr1325Q8VF43 315 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr1019Q8VGS3 310 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Kdelr2Q9CQM2 212 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Nol3Q9D1X0 220 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 4930578G10RikQ9D4Q4 153 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Alg5Q9DB25 324 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 PnckQ9QYK9 343 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gon4lQ9DB00 2260 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm3604A0A087WPN2 559 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 A0A286YDM2 672 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Rhox13F6YCR7 232 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 TshrP47750 764 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 RykQ01887 594 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Prss55Q14BX2 321 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Abraxas2Q3TCJ1 415 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Fam98aQ3TJZ6 515 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm732Q3V0P9 516 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Taar7dQ5QD10 358 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Phf12Q5SPL2 1003 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Efemp1Q8BPB5 493 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Chpt1Q8C025 398 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ccdc71Q8VEG0 433 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 B4galt3Q91YY2 395 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Capns2Q9D7J7 247 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 AcoxlQ9DBS4 632 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Dnajb1Q9QYJ3 340 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 GghQ9Z0L8 317 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Uba2Q9Z1F9 638 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vmn2r-ps130A0A140T8U3 855 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 A0A286YD17 136 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Cldn34b1B1AZQ8 209 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm8220F6YKI2 213 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Sult3a2G5E904 293 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vmn2r88L7N1W8 857 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 FkbplO35450 347 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Pdlim1O70400 327 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Mrpl10Q3TBW2 262 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ermp1Q3UVK0 898 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ppp3r1Q63810 170 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 OmpQ64288 163 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Svs6Q64356 99 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Klf8Q8BLM0 355 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Zfp101Q8BP18 612 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Mill2Q8HWE5 355 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Tram1l1Q8QZR0 363 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr164Q8VF87 315 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr683Q8VGV1 319 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Nt5c1bQ91YE9 573 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Agpat5Q9D1E8 365 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 2200002D01RikQ9D809 114 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Cldn34b2Q9D9N2 209 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 1700034I23RikQ9D9Q3 184 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 GhrlQ9EQX0 117 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Herpud2Q9JJC9 404 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Slc5a3Q9JKZ2 718 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 SpaarA0A1B0GSZ0 75 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vmn2r18E9Q280 788 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm3542K7N6U2 270 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm8281L7N235 204 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Prl7a1O54830 266 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Cbfa2t3O54972 620 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 St3gal5O88829 414 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Apoa2P09813 102 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Eif5aP63242 154 aaKnown RBP9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Rnft2Q3UF64 445 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Hist2h2abQ64522 130 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr1288Q7TQY0 312 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ppp1r8Q8R3G1 351 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ptgr1Q91YR9 329 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Prss23Q9D6X6 382 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gfra4Q9JJT2 260 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Calm4Q9JM83 148 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Insl5Q9WUG6 135 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 H2-BlV9GXR0 257 aa9.6□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Robo3Q9Z2I4 1366 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm3854A0A1B0GSS6 495 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Spats1A2RRY8 269 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vmn2r114E9Q281 856 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vmn1r55E9Q8I6 310 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Spdye4cI6XKQ3 339 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Capn5O08688 640 aaKnown RBP9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 NsmafO35242 920 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Adam19O35674 920 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 CcnkO88874 554 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Vipr1P97751 459 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 FcamrQ2TB54 535 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gm853Q3UNZ2 425 aa9.59□□□□□ -0.87
Ldlr-201ENSMUST00000034713 MlipQ5FW52 269 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms